RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 OR8H3Q8N146 312 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 Q8N402 240 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 SIGLECL1Q8N7X8 197 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 GDPD1Q8N9F7 314 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 S100ZQ8WXG8 99 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 TOMM40LQ969M1 308 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ST6GALNAC6Q969X2 333 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF48Q96MX3 618 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 S1PR3Q99500 378 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 AGMATQ9BSE5 352 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 THAP7Q9BT49 309 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 DPAGT1Q9H3H5 408 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ZNRD1Q9P1U0 126 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF221Q9UK13 617 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 OR2W1Q9Y3N9 320 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 RBM7Q9Y580 266 aaKnown RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 SOX21Q9Y651 276 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 POMT1Q9Y6A1 747 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 BTBD17A6NE02 478 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 VGLL3A8MV65 326 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 HSD17B6O14756 317 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 LANCL1O43813 399 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 TUSC2O75896 110 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 PMP2P02689 132 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 OR8U9P0C7N5 309 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 NFYAP23511 347 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-204ENST00000558172 FCGR2CP31995 323 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 HRH1P35367 487 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 IER3P46695 156 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 GPR12P47775 334 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 LUMP51884 338 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-204ENST00000558172 HILS1P60008 231 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 TSPAN5P62079 268 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 BAMBIQ13145 260 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF79Q15937 498 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 LRRC75BQ2VPJ9 315 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 PLA1AQ53H76 456 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
LRRC28-204ENST00000558172 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 TMEM17Q86X19 198 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-204ENST00000558172 OR6F1Q8NGZ6 308 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 OR8U1Q8NH10 309 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 OR5R1Q8NH85 324 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 C17orf50Q8WW18 174 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 SSMEM1Q8WWF3 244 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 RTN4IP1Q8WWV3 396 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-204ENST00000558172 DEDD2Q8WXF8 326 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 SSX3Q99909 188 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 IFI27L2Q9H2X8 130 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 ABCB10Q9NRK6 738 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 EHFQ9NZC4 300 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.06
LRRC28-204ENST00000558172 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 MDFIC2A0A1B0GVS7 189 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 ANKRD20A5PA0PJZ0 165 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 CLDN34H7C241 214 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 PPYP01298 95 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 CD74P04233 296 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 CD3DP04234 171 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 IFNA6P05013 189 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 AKAIN1P0CW23 69 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 SAA2P0DJI9 122 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-204ENST00000558172 RFX2P48378 723 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 AP3S2P59780 193 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 MEF2DQ14814 521 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 STEAP1BQ6NZ63 245 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF833PQ6ZTB9 187 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 DYNAPQ8N1N2 210 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 ARRDC1Q8N5I2 433 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 ABHD14BQ96IU4 210 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 SRRQ9GZT4 340 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 PARP12Q9H0J9 701 aaKnown RBP8.45□□□□□ -1.06
LRRC28-204ENST00000558172 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 RNF150Q9ULK6 438 aa8.45□□□□□ -1.06
LRRC28-204ENST00000558172 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 HOXA3O43365 443 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-204ENST00000558172 RAB3DO95716 219 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 AADACP22760 399 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 HERV-K104P61576 105 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 DIAPH2-AS1Q14236 149 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 HABP2Q14520 560 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-204ENST00000558172 MSMO1Q15800 293 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF660Q6AZW8 331 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-204ENST00000558172 LPCAT3Q6P1A2 487 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 MOB3BQ86TA1 216 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 TOMM5Q8N4H5 51 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF645Q8N7E2 425 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 ZBTB34Q8NCN2 500 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF251Q9BRH9 671 aa8.44□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF2Q9BSG1 426 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms