RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 HBE1P02100 147 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 IGHV3-43DP0DP04 118 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 IL24Q13007 206 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 OR8B8Q15620 311 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 BATFQ16520 125 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 ASPHD1Q5U4P2 390 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 MCEMP1Q8IX19 187 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 MKXQ8IYA7 352 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 TMEM256Q8N2U0 113 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 IFI44Q8TCB0 444 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 PARLQ9H300 379 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 ATP23Q9Y6H3 246 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 A0A1B0GW64 132 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 CLEC18AA5D8T8 446 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 A6NNC1 897 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 MRPL33O75394 65 aaKnown RBP10.45□□□□□ -0.74
LDLR-205ENST00000557933 SCGB1D1O95968 90 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 P04436 131 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 SRPXP78539 464 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 CLEC18CQ8NCF0 446 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 OR13D1Q8NGV5 346 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 OR2V1Q8NHB1 315 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 M1APQ8TC57 530 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 LURAP1Q96LR2 239 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 TOX3O15405 576 aaPredicted RBP10.45□□□□□ -0.74
LDLR-205ENST00000557933 CBR3O75828 277 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 SP9P0CG40 484 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 RPL23P62829 140 aaKnown RBP10.45□□□□□ -0.74
LDLR-205ENST00000557933 BAXQ07812 192 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 SLC38A11Q08AI6 406 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 BSXQ3C1V8 233 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 PRR31Q5SQ13 230 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 ASCL4Q6XD76 172 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 FOXL2NBQ6ZUU3 175 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 RFESDQ8TAC1 157 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 SIRT7Q9NRC8 400 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 TRAPPC2LQ9UL33 140 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 OR2W1Q9Y3N9 320 aa10.45□□□□□ -0.74
LDLR-205ENST00000557933 TRAV38-1A0A0B4J264 116 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 Q0VFX4 171 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 FAM78BQ5VT40 261 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 KMT5CQ86Y97 462 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 H1FOOQ8IZA3 346 aaPredicted RBP10.44□□□□□ -0.74
LDLR-205ENST00000557933 C10orf35Q96D05 121 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 TNCP24821 2201 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 H0Y980 276 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 FGF12P61328 243 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
LDLR-205ENST00000557933 ALKBH6Q3KRA9 238 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 TEX38Q6PEX7 206 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 OR5D13Q8NGL4 314 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 CPT1CQ8TCG5 803 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 SAP25Q8TEE9 199 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 IMMP1LQ96LU5 166 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 CISD1Q9NZ45 108 aaKnown RBP10.44□□□□□ -0.74
LDLR-205ENST00000557933 TCAPO15273 167 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 SPINK4O60575 86 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 DFFBO76075 338 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 CER1O95813 267 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 IGLV2-14P01704 120 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 CEACAM6P40199 344 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 THBS3P49746 956 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 TMEM241Q24JQ0 296 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 ZNF324BQ6AW86 544 aaPredicted RBP10.44□□□□□ -0.74
LDLR-205ENST00000557933 SP5Q6BEB4 398 aaPredicted RBP10.44□□□□□ -0.74
LDLR-205ENST00000557933 TMEM183AQ8IXX5 376 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 IMMP2LQ96T52 175 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 PITPNC1Q9UKF7 332 aa10.44□□□□□ -0.74
LDLR-205ENST00000557933 HEATR1Q9H583 2144 aaKnown RBP10.43□□□□□ -0.74
LDLR-205ENST00000557933 ZG16O60844 167 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 FRMD6-AS1P0C7T7 363 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
LDLR-205ENST00000557933 ZNF124Q15973 351 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 Q3ZCU0 254 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 ZNF114Q8NC26 417 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 IL22RA2Q969J5 263 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 DDA1Q9BW61 102 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 PATZ1Q9HBE1 687 aaKnown RBP10.43□□□□□ -0.74
LDLR-205ENST00000557933 DLL3Q9NYJ7 618 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
LDLR-205ENST00000557933 A8MWP6 167 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 GRPP07492 148 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 C1QTNF9P0C862 333 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 MPLP40238 635 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 DBX2Q6ZNG2 339 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 OR1L1Q8NH94 360 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 TAF15Q92804 592 aaKnown RBP eCLIP10.43□□□□□ -0.74
LDLR-205ENST00000557933 OR5B12Q96R08 314 aa10.43□□□□□ -0.74
LDLR-205ENST00000557933 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
LDLR-205ENST00000557933 KIR2DS1A0A191URI9 304 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms