RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 OR1P1Q8NH06 330 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 TMEM37Q8WXS4 190 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 TMEM45BQ96B21 275 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 TRBV6-6A0A0A6YYG2 114 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 TGOLN2O43493 480 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 RAMP3O60896 148 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 KRASP01116 189 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 GNG3P63215 75 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 PMP22Q01453 160 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 Q6P435 159 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 ZNF573Q86YE8 665 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 ZNF664Q8N3J9 261 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 DRAM1Q8N682 238 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 OR51G1Q8NGK1 321 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 OR4F5Q8NH21 305 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 PINX1Q96BK5 328 aaKnown RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 OR4F4Q96R69 305 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 PARLQ9H300 379 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 CLN8Q9UBY8 286 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 TNRC6BQ9UPQ9 1833 aaKnown RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 USF3Q68DE3 2245 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 FAM166BA8MTA8 275 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 PPP5D1E7EU14 171 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 H7BYZ3 331 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 KBTBD11O94819 623 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 OR2H2O95918 312 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 SELEP16581 610 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 BMP5P22003 454 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 G6PCP35575 357 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 HOXA4Q00056 320 aaPredicted RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 ZNF816Q0VGE8 651 aaPredicted RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 CYP2G1PQ6ZSU1 146 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 WFIKKN1Q96NZ8 548 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
SRP54-213ENST00000556994 PILRBQ9UKJ0 227 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
SRP54-213ENST00000556994 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 SS18L1O75177 396 aaPredicted RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 LHX2P50458 406 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 OR5R1Q8NH85 324 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 OR5B12Q96R08 314 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 LIN7CQ9NUP9 197 aaKnown RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 FUT9Q9Y231 359 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 PCSK5Q92824 1860 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 IGKV3D-15A0A087WSY6 115 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 NTN3O00634 580 aaPredicted RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 DVL1O14640 695 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 IFNA10P01566 189 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 CEBPDP49716 269 aaPredicted RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 PSMB3P49720 205 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 IDH3GP51553 393 aaPredicted RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 PLP2Q04941 152 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 TNFRSF9Q07011 255 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 TFF3Q07654 80 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 NUFIP2Q7Z417 695 aaKnown RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 LINC00596Q86U02 117 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 ZNF808Q8N4W9 903 aaPredicted RBP9.61□□□□□ -0.87
SRP54-213ENST00000556994 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 HLA-CQ95604 372 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 LINC00470Q9BZP3 86 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 OR51I2Q9H344 312 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
SRP54-213ENST00000556994 SLC31A2O15432 143 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 PAGE4O60829 102 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 SELLP14151 372 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 EGR1P18146 543 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 MAGEA5P43359 124 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 CLDN18P56856 261 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 LINC00205P59089 165 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 USF2Q15853 346 aaPredicted RBP9.6□□□□□ -0.87
SRP54-213ENST00000556994 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 ZNF497Q6ZNH5 498 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 WDR86Q86TI4 376 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 PYGO2Q9BRQ0 406 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 SIT1Q9Y3P8 196 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 A8MWP6 167 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 MT-CO3P00414 261 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 FGF7P21781 194 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 NUBP1P53384 320 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 FAM3BP58499 235 aaPredicted RBP9.6□□□□□ -0.87
SRP54-213ENST00000556994 SSTP61278 116 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 GNB2P62879 340 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 RPL30P62888 115 aaKnown RBP9.6□□□□□ -0.87
SRP54-213ENST00000556994 ZXDAP98168 799 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 FFAR4Q5NUL3 377 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 TIPARPQ7Z3E1 657 aaKnown RBP9.6□□□□□ -0.87
SRP54-213ENST00000556994 TDHQ8IZJ6 230 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 MAFAQ8NHW3 353 aaPredicted RBP9.6□□□□□ -0.87
SRP54-213ENST00000556994 APH1AQ96BI3 265 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 THOC3Q96J01 351 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms