RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 NPFFO15130 113 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 ARPC1BO15143 372 aaKnown RBP13.37□□□□□ -0.27
PCNX4-213ENST00000556907 H2AFB2P0C5Z0 115 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 AADACP22760 399 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 NFYAP23511 347 aaPredicted RBP13.37□□□□□ -0.27
PCNX4-213ENST00000556907 ZBTB25P24278 435 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 UCP3P55916 312 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 Q3ZCU0 254 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 LY6G6FQ5SQ64 297 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 HCP5Q6MZN7 132 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 SCGB3A2Q96PL1 93 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 JMJD8Q96S16 334 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 VSIG4Q9Y279 399 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 MXRA5Q9NR99 2828 aa13.37□□□□□ -0.27
PCNX4-213ENST00000556907 SETD2Q9BYW2 2564 aaPredicted RBP13.36□□□□□ -0.27
PCNX4-213ENST00000556907 MEX3AA1L020 520 aaKnown RBP13.36□□□□□ -0.27
PCNX4-213ENST00000556907 INMT-MINDY4F8WBC2 141 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 HSPA12AO43301 675 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 PEX14O75381 377 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 LGALS4P56470 323 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 LOXL3P58215 753 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 GNMTQ14749 295 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 RBMS3Q6XE24 437 aaKnown RBP13.36□□□□□ -0.27
PCNX4-213ENST00000556907 PNKDQ8N490 385 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 ZNF596Q8TC21 504 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 MARCH1Q8TCQ1 289 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 CLEC7AQ9BXN2 247 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 GFOD1Q9NXC2 390 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 RDH8Q9NYR8 311 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 OR2W1Q9Y3N9 320 aa13.36□□□□□ -0.27
PCNX4-213ENST00000556907 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
PCNX4-213ENST00000556907 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 A0A0B4J293 547 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 FAM172BPA6NC97 362 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 YPEL1O60688 119 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 PRAF2O60831 178 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 RGS11O94810 467 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 PGAM2P15259 253 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 PRRX1P54821 245 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 ABHD12Q8N2K0 398 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 OR52L2PQ8NGH6 319 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 RFESDQ8TAC1 157 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 YPEL2Q96QA6 119 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 OR2S2Q9NQN1 319 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 GPR132Q9UNW8 380 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 FLVCR2Q9UPI3 526 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 FAM96BQ9Y3D0 163 aa13.35□□□□□ -0.27
PCNX4-213ENST00000556907 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 IGHV3-43A0A0B4J1X8 118 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 VGLL3A8MV65 326 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 ODF3BA8MYP8 253 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 TOR1AO14656 332 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 MMP23AO75900 390 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 DHFRP00374 187 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
PCNX4-213ENST00000556907 FBP1P09467 338 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 IGHV3-43DP0DP04 118 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 OMGP23515 440 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 COX7A1P24310 79 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 PPP1CCP36873 323 aaKnown RBP13.34□□□□□ -0.27
PCNX4-213ENST00000556907 TAS2R31P59538 309 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 FXYD4P59646 89 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 UBE2MP61081 183 aaKnown RBP13.34□□□□□ -0.27
PCNX4-213ENST00000556907 KLRD1Q13241 179 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 MINOS1Q5TGZ0 78 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 SLC38A6Q8IZM9 456 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 BEND2Q8NDZ0 799 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 OR9G1Q8NH87 305 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 ZFAND1Q8TCF1 268 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 EDARADDQ8WWZ3 215 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 TOMM40LQ969M1 308 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 ZNF486Q96H40 463 aaPredicted RBP13.34□□□□□ -0.27
PCNX4-213ENST00000556907 RSRP1Q9BUV0 290 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 PARP12Q9H0J9 701 aaKnown RBP13.34□□□□□ -0.27
PCNX4-213ENST00000556907 GNG12Q9UBI6 72 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 MINOS1-NBL1R4GNA1 71 aa13.34□□□□□ -0.27
PCNX4-213ENST00000556907 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 C7orf66A4D0T2 115 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 TCF21O43680 179 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 RLN1P04808 185 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 ARG1P05089 322 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 NFYBP25208 207 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 SAA4P35542 130 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 CEACAM6P40199 344 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 LUMP51884 338 aaPredicted RBP13.33□□□□□ -0.28
PCNX4-213ENST00000556907 BAMBIQ13145 260 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 MSMO1Q15800 293 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 TATDN3Q17R31 274 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 MORN2Q502X0 79 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 RUSC1-AS1Q66K80 236 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 LPCAT3Q6P1A2 487 aa13.33□□□□□ -0.28
PCNX4-213ENST00000556907 LDLRAD3Q86YD5 345 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms