RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PPIAL4EA0A075B759 164 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 ODAMA1E959 279 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 PPIAL4DF5H284 164 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 PPIAL4FP0DN26 164 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 CEBPDP49716 269 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 PDLIM4P50479 330 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 CCL8P80075 99 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 MRPS11P82912 194 aaKnown RBP11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 AESQ08117 197 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 MST1LQ2TV78 715 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 LY6G6FQ5SQ64 297 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 LDLRAD3Q86YD5 345 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 BVESQ8NE79 360 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 CHIAQ9BZP6 476 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 TMEM106BQ9NUM4 274 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 PPIAL4AQ9Y536 164 aa11.78□□□□□ -0.52
TRAPPC6B-206ENST00000556765 TRIM77I1YAP6 450 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 NDUFS8O00217 210 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ITGB1BP1O14713 200 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 MPPED1O15442 326 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 HBZP02008 142 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SLC25A4P12235 298 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 PI3P19957 117 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 GNRHRP30968 328 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 CD80P33681 288 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMEM187Q14656 261 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SLC9A3R2Q15599 337 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 BOLLQ8N9W6 283 aaKnown RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ZNF418Q8TF45 676 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SECTM1Q8WVN6 248 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RAB1BQ9H0U4 201 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 METTL8Q9H825 291 aaKnown RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 JPT1Q9UK76 154 aa11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 PAIP2BQ9ULR5 123 aaKnown RBP11.77□□□□□ -0.53
TRAPPC6B-206ENST00000556765 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 H0Y980 276 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RGS13O14921 159 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 HFEQ30201 348 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C9orf62Q8N4C0 152 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 OR10A7Q8NGE5 316 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SPIN2AQ99865 258 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SPIN2BQ9BPZ2 258 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMEM222Q9H0R3 208 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMED3Q9Y3Q3 217 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ARFGEF3Q5TH69 2177 aa11.76□□□□□ -0.53
TRAPPC6B-206ENST00000556765 DSCAML1Q8TD84 2053 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TRGV10A0A0A0MS01 117 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 F2RL2O00254 374 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RPA2P15927 270 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 CEACAM6P40199 344 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 GLIPR1P48060 266 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C2orf68Q2NKX9 166 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 MRGPRDQ8TDS7 321 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 CORO2AQ92828 525 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 ARL11Q969Q4 196 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 LIN7CQ9NUP9 197 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TAS2R3Q9NYW6 316 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
TRAPPC6B-206ENST00000556765 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 hADV38S2A0JD32 116 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 G3V3Q6 166 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 GPR37O15354 613 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 YPEL1O60688 119 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 SIX6O95475 246 aa11.74□□□□□ -0.53
TRAPPC6B-206ENST00000556765 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms