RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 ZNF780AO75290 641 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 JTBO76095 146 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 HBZP02008 142 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 IFNA6P05013 189 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 CD2P06729 351 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 LGALS1P09382 135 aaKnown RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 GTF2F2P13984 249 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 CPEP16870 476 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 BLVRBP30043 206 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 ZNF93P35789 620 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 MORN2Q502X0 79 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 C6orf183Q5T699 404 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 ZNF660Q6AZW8 331 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 MS4A15Q8N5U1 240 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 OR4K15Q8NH41 348 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 CST11Q9H112 138 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 SPACA1Q9HBV2 294 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 TMEM138Q9NPI0 162 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 OR2S2Q9NQN1 319 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 SOX15O60248 233 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 TMEM267Q0VDI3 215 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-223ENST00000556689 ECSCRQ19T08 205 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 SLC22A6Q4U2R8 563 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 YIF1BQ5BJH7 314 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 DDI2Q5TDH0 399 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 ANKRD13BQ86YJ7 626 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 TCTEX1D1Q8N7M0 179 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 NPBQ8NG41 125 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 GPR148Q8TDV2 347 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 CASTOR1Q8WTX7 329 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 NABP2Q9BQ15 211 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 TMED9Q9BVK6 235 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 ETAA1Q9NY74 926 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 CKLFQ9UBR5 152 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 STUB1Q9UNE7 303 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 NUBP2Q9Y5Y2 271 aa9.73□□□□□ -0.85
SHMT2-223ENST00000556689 A0A1W2PP11 408 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 NDUFA3O95167 84 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 IGHV3-11P01762 117 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 CD1AP06126 327 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 ARSBP15848 533 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 CD36P16671 472 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 RCC1P18754 421 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-223ENST00000556689 BDKRB2P30411 391 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-223ENST00000556689 PPP3R1P63098 170 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 GPR176Q14439 515 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 HAGHQ16775 308 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 PYHIN1Q6K0P9 492 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 ODF3L1Q8IXM7 274 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 ABHD14AQ9BUJ0 271 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 RSRP1Q9BUV0 290 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 MRPL20Q9BYC9 149 aaKnown RBP9.72□□□□□ -0.85
SHMT2-223ENST00000556689 TAF9BQ9HBM6 251 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 NDUFA13Q9P0J0 144 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 SSR3Q9UNL2 185 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 FBXO7Q9Y3I1 522 aa9.72□□□□□ -0.85
SHMT2-223ENST00000556689 SMIM31A0A1B0GVY4 71 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 OGG1O15527 345 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 GALP22466 123 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 MYL9P24844 172 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 CD40LGP29965 261 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-223ENST00000556689 CX3CL1P78423 397 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 TPBGQ13641 420 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 DMKNQ6E0U4 476 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-223ENST00000556689 RAB12Q6IQ22 244 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 GAPTQ8N292 157 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 OR13F1Q8NGS4 319 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 IL17DQ8TAD2 202 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 GHSRQ92847 366 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 TMEM106AQ96A25 262 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 RHOVQ96L33 236 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 MS4A10Q96PG2 267 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 TUBA4BQ9H853 241 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 KCNIP1Q9NZI2 227 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 RCC2Q9P258 522 aaKnown RBP9.71□□□□□ -0.86
SHMT2-223ENST00000556689 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 PEX16Q9Y5Y5 336 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 A3GALT2U3KPV4 340 aa9.71□□□□□ -0.86
SHMT2-223ENST00000556689 AIREO43918 545 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 CA11O75493 328 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-223ENST00000556689 RANBP1P43487 201 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms