RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 CLPSP04118 112 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 CD1BP29016 333 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 DEFB123Q8N688 67 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 RCC1LQ96I51 464 aaKnown RBP12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZDHHC8Q9ULC8 765 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 CXorf1O96002 111 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 RIPPLY2Q5TAB7 128 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 ANAPC1Q9H1A4 1944 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 K7EQM0 130 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 PSG5Q15238 335 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 Q6ZN92 141 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 CLDND2Q8NHS1 167 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 PARLQ9H300 379 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 NAGKQ9UJ70 344 aa12.9□□□□□ -0.34
ARHGEF40-207ENST00000556399 NDUFA2O43678 99 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR2H2O95918 312 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 RAB24Q969Q5 203 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 TANC1Q9C0D5 1861 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 PRDM14Q9GZV8 571 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF835Q9Y2P0 537 aa12.9□□□□□ -0.35
ARHGEF40-207ENST00000556399 ST8SIA5O15466 376 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 KBTBD11O94819 623 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 KIR2DS2P43631 304 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 RAB7AP51149 207 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 AARDQ4LEZ3 155 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 MDP1Q86V88 176 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR4S2Q8NH73 311 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF837Q96EG3 531 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 CHCHD2Q9Y6H1 151 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 SYNGR3O43761 229 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 DEFA4P12838 97 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 PCOLCEQ15113 449 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 SAXO1Q8IYX7 474 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR2M7Q8NG81 312 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR52L2PQ8NGH6 319 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR2J1Q9GZK6 312 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 HS3ST3B1Q9Y662 390 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 K7N7A8 449 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 UCP1P25874 307 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 CCL20P78556 96 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF441Q8N8Z8 693 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 VPS25Q9BRG1 176 aa12.89□□□□□ -0.35
ARHGEF40-207ENST00000556399 hCG_38984A0A1B0GV85 526 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 PAX5Q02548 391 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 PLXNA2O75051 1894 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 GNB1P62873 340 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 QRFPP83859 136 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF600Q6ZNG1 722 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 PLXNA4Q9HCM2 1894 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 CFPP27918 469 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 COTL1Q14019 142 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 ICAM4Q14773 271 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 WFIKKN1Q96NZ8 548 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 TECRQ9NZ01 308 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-207ENST00000556399 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 AGAP20933 346 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 HEPN1Q6WQI6 88 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 MED12Q93074 2177 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 NFAM1Q8NET5 270 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 A0A1W2PQM1 296 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 HELTA6NFD8 242 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 CAMPP49913 170 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 SCGB2A2Q13296 93 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 OR4C5Q8NGB2 326 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 MESP1Q9BRJ9 268 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 SLC31A2O15432 143 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 SPNS3Q6ZMD2 512 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 ZNF645Q8N7E2 425 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 HSPB9Q9BQS6 159 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 EGLN1Q9GZT9 426 aa12.87□□□□□ -0.35
ARHGEF40-207ENST00000556399 HBZP02008 142 aa12.86□□□□□ -0.35
ARHGEF40-207ENST00000556399 ELOBQ15370 118 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms