RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 RNF222A6NCQ9 220 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 C17orf51A8MQB3 221 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 SULT1C2O00338 296 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CXCR6O00574 342 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 PPP1R2P9O14990 202 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 RGS5O15539 181 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ERI3O43414 337 aaKnown RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CDC40O60508 579 aaKnown RBP eCLIP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 LYPLA1O75608 230 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR2J3O76001 311 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 UTS2O95399 124 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 IGHV3-23P01764 117 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ISG15P05161 165 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR10J4P0C629 311 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR8U9P0C7N5 309 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 C8orf88P0DMB2 117 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ABOP16442 354 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CELP19835 753 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ATP5A1P25705 553 aaKnown RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 HTR2CP28335 458 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 DNASE1L1P49184 302 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 KLF3P57682 345 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 RAB38P57729 211 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 DNAJB13P59910 316 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 BTN3A2P78410 334 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CDK10Q15131 360 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 MAPK14Q16539 360 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 DGUOKQ16854 277 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 SMIM21Q3B7S5 101 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 SAMD4BQ5PRF9 694 aaKnown RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 FAHD1Q6P587 224 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CMC1Q7Z7K0 106 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 S100A7AQ86SG5 101 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR10G3Q8NGC4 313 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR51G2Q8NGK0 314 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 OR6K3Q8NGY3 331 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF721Q8TF20 911 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 TRUB1Q8WWH5 349 aaKnown RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 UCN3Q969E3 161 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 SLC25A38Q96DW6 304 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 YIPF6Q96EC8 236 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ZHX1-C8orf76Q96EF9 292 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM208Q9BTX3 173 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 HCAR1Q9BXC0 346 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 MS4A8Q9BY19 250 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 DEFB127Q9H1M4 99 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 MIXL1Q9H2W2 232 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ANKRD19PQ9H560 264 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 PLEKHA1Q9HB21 404 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 RAB18Q9NP72 206 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ACOXLQ9NUZ1 547 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 RSL24D1Q9UHA3 163 aaKnown RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 HHLA2Q9UM44 414 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 ANGPT4Q9Y264 503 aa3.11□□□□□ -1.91
PRPF39-209ENST00000556353 CHCHD2Q9Y6H1 151 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-209ENST00000556353 PPIAL4CA0A0B4J2A2 164 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 A0A1W2PRF3 423 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 A0A1W2PRM7 423 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 TCRBV9S1A1TA0A576 114 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 H7C2Y5 167 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PLPP1O14494 284 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PLPP3O14495 311 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 CHEK1O14757 476 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SH2D1BO14796 132 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 AZIN1O14977 448 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 UBDO15205 165 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 CHST1O43916 411 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 HSBP1O75506 76 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 EEDO75530 441 aaKnown RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SC5DO75845 299 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 NDUFA7O95182 113 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 FARS2O95363 451 aaKnown RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 TNFAIP8O95379 198 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SYNGR4O95473 234 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 TTC4O95801 387 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 HLA-AP01891 365 aaKnown RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 HTR1AP08908 422 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PPIAL4GP0DN37 164 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF35P13682 527 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GABRA1P14867 456 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 MUC1P15941 1255 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 AKR1C4P17516 323 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SERPINA2P20848 420 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 FUT3P21217 361 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 IGHV1-2P23083 117 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 F2RP25116 425 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 S100A11P31949 105 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PMELP40967 661 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 AKR1C3P42330 323 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 RAB7AP51149 207 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SSR4P51571 173 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 CAV2P51636 162 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF85Q03923 595 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 RGS1Q08116 209 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ST3GAL3Q11203 375 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SELENBP1Q13228 472 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GK3PQ14409 553 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 TRAM1Q15629 374 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms