RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 OR56B1Q8NGI3 324 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 PTX4Q96A99 478 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 FAM3DQ96BQ1 224 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 GFI1Q99684 422 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 CENPOQ9BU64 300 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 MRPL20Q9BYC9 149 aaKnown RBP9.9□□□□□ -0.82
SNX6-207ENST00000556303 C12orf4Q9NQ89 552 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 ZNF107Q9UII5 783 aaPredicted RBP9.9□□□□□ -0.82
SNX6-207ENST00000556303 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
SNX6-207ENST00000556303 SAA2-SAA4A0A096LPE2 208 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 OR5H14A6NHG9 310 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 NBR2O15453 112 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 RBBP9O75884 186 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 NDUFA3O95167 84 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 DIRAS3O95661 229 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 PRB2P02812 416 aaPredicted RBP9.89□□□□□ -0.83
SNX6-207ENST00000556303 SAA2P0DJI9 122 aaPredicted RBP9.89□□□□□ -0.83
SNX6-207ENST00000556303 PSMB8P28062 276 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 TMEM50BP56557 158 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 P2RY14Q15391 338 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 C5orf64Q2M2E5 130 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 C2orf76Q3KRA6 126 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 CD200R1LQ6Q8B3 271 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 C8orf86Q6ZUL3 223 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 OR8U1Q8NH10 309 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 HSPB9Q9BQS6 159 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 AGMATQ9BSE5 352 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 TOLLIPQ9H0E2 274 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 IFI27L2Q9H2X8 130 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 Q9N2K0 584 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 KIAA1456Q9P272 454 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 AK3Q9UIJ7 227 aa9.89□□□□□ -0.83
SNX6-207ENST00000556303 COL7A1Q02388 2944 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 CCL24O00175 119 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 CEACAM6P40199 344 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 OR3A3P47888 321 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 SERPINB10P48595 397 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 GABARAPL2P60520 117 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 HLA-DRB3P79483 266 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 DCTN2Q13561 401 aaKnown RBP9.88□□□□□ -0.83
SNX6-207ENST00000556303 LIN54Q6MZP7 749 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 CNBD2Q96M20 576 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 KCTD7Q96MP8 289 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 CMSS1Q9BQ75 279 aaKnown RBP9.88□□□□□ -0.83
SNX6-207ENST00000556303 YTHDF1Q9BYJ9 559 aaKnown RBP9.88□□□□□ -0.83
SNX6-207ENST00000556303 OR51J1Q9H342 316 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 KCNK15Q9H427 330 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 NDUFB11Q9NX14 153 aa9.88□□□□□ -0.83
SNX6-207ENST00000556303 TRDV1A0A1B0GX56 115 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 ST8SIA5O15466 376 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 HSPA12AO43301 675 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 DENRO43583 198 aaKnown RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 CT45A6P0DMU7 189 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 CT45A5P0DMU8 189 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 CT45A7P0DMV0 189 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 SLC2A2P11168 524 aaPredicted RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 RAB6AP20340 208 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 PPIFP30405 207 aaKnown RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 MAP2K4P45985 399 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 VEGFCP49767 419 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 CRIP2P52943 208 aaPredicted RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 MRPS15P82914 257 aaKnown RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 ZNF660Q6AZW8 331 aaPredicted RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 C5orf24Q7Z6I8 188 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 TCTEX1D1Q8N7M0 179 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.87□□□□□ -0.83
SNX6-207ENST00000556303 SETD6Q8TBK2 473 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 MYOZ3Q8TDC0 251 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 C4orf3Q8WVX3 66 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 ARHGAP5-AS1Q96IT6 56 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 CYYR1Q96J86 154 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 UBE2E2Q96LR5 201 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 PECRQ9BY49 303 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 GAB2Q9UQC2 676 aa9.87□□□□□ -0.83
SNX6-207ENST00000556303 IGHV7-81A0A0B4J1V7 117 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 IFITM5A6NNB3 132 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 TRDCB7Z8K6 153 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 RAMP3O60896 148 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 IGLV1-40P01703 118 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 GADD45AP24522 165 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 MYL9P24844 172 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 RUNX1Q01196 453 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 ARL6IP1Q15041 203 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 SSX1Q16384 188 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 SRSF7Q16629 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
SNX6-207ENST00000556303 TMEM65Q6PI78 240 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 C18orf65Q6ZTR6 163 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 MINDY2Q8NBR6 621 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 OR4A4PQ8NGN8 299 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 OR5M8Q8NGP6 311 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 RAB3CQ96E17 227 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 RAX2Q96IS3 184 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 C11orf54Q9H0W9 315 aaPredicted RBP9.86□□□□□ -0.83
SNX6-207ENST00000556303 Q9H521 79 aa9.86□□□□□ -0.83
SNX6-207ENST00000556303 WASHC3Q9Y3C0 194 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms