RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SDC2P34741 201 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF93P35789 620 aaPredicted RBP5.31□□□□□ -1.56
PSEN1-216ENST00000556066 REG1BP48304 166 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 RAB7AP51149 207 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF45Q02386 682 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 IL13RA2Q14627 380 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 RGS21Q2M5E4 152 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 SLC22A6Q4U2R8 563 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 ATAD3CQ5T2N8 411 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 RSBN1Q5VWQ0 802 aaPredicted RBP5.31□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF529Q6P280 563 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 RPL22L1Q6P5R6 122 aaKnown RBP5.31□□□□□ -1.56
PSEN1-216ENST00000556066 TMEM91Q6ZNR0 172 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 CCDC190Q86UF4 302 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 OSR2Q8N2R0 312 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 OR13C5Q8NGS8 318 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 CCDC107Q8WV48 283 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 KCTD7Q96MP8 289 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 NOL4LQ96MY1 436 aaPredicted RBP5.31□□□□□ -1.56
PSEN1-216ENST00000556066 SDHCQ99643 169 aaPredicted RBP5.31□□□□□ -1.56
PSEN1-216ENST00000556066 METTL9Q9H1A3 318 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 MIXL1Q9H2W2 232 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 TMEM138Q9NPI0 162 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 RHBDL2Q9NX52 303 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 BABAM2Q9NXR7 383 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 LINC00527Q9UJ94 153 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 STAB2Q8WWQ8 2551 aa5.31□□□□□ -1.56
PSEN1-216ENST00000556066 IGHV3-43A0A0B4J1X8 118 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 A0A1W2PP11 408 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 A0A1W2PPI3 338 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 A0A1W2PPK0 400 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 TMEM30CPA0ZSE6 113 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 NCBP2LA6PVI3 153 aaKnown RBP5.3□□□□□ -1.56
PSEN1-216ENST00000556066 NPIPB11E5RHQ5 1161 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 SDCBPO00560 298 aaPredicted RBP5.3□□□□□ -1.56
PSEN1-216ENST00000556066 HSD17B6O14756 317 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 RGS5O15539 181 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 UPK1BO75841 260 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 IGHV3-43DP0DP04 118 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 SPNP16150 400 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
PSEN1-216ENST00000556066 FGF9P31371 208 aaPredicted RBP5.3□□□□□ -1.56
PSEN1-216ENST00000556066 ETV6P41212 452 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 KCNJ3P48549 501 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 RBM11P57052 281 aaKnown RBP5.3□□□□□ -1.56
PSEN1-216ENST00000556066 CTAG1AP78358 180 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 OXA1LQ15070 435 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 TRIM16LQ309B1 348 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 CCDC58Q4VC31 144 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 DEFB121Q5J5C9 76 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 CD200R1LQ6Q8B3 271 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 ASCL4Q6XD76 172 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 JAGN1Q8N5M9 183 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 GHSRQ92847 366 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 ARL11Q969Q4 196 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 SLC25A46Q96AG3 418 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 SMIM19Q96E16 107 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 ZMAT4Q9H898 229 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 LINC00574Q9H8X3 128 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 CKLFQ9UBR5 152 aa5.3□□□□□ -1.56
PSEN1-216ENST00000556066 TRAV8-7A0A075B6U6 113 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 IGHV1-3A0A0C4DH29 117 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A18PA6NE21 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A16PA6NEW6 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A9PA6NNJ1 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A12PA8MX19 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A5PA8MXJ8 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 MCRIP1C9JLW8 97 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 AIPO00170 330 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 OGG1O15527 345 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 GAPDHP04406 335 aaKnown RBP5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A15PP0C7V4 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A13PP0C7W8 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A14PP0C7W9 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM90A24PP0C7X0 464 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 GTF2F2P13984 249 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 GZMHP20718 246 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 BCAP31P51572 246 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 LUMP51884 338 aaPredicted RBP5.29□□□□□ -1.56
PSEN1-216ENST00000556066 RAB25P57735 213 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 RPL11P62913 178 aaKnown RBP5.29□□□□□ -1.56
PSEN1-216ENST00000556066 SLC35B1P78383 322 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 GPR50Q13585 617 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 GPR176Q14439 515 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 Q499Y3 187 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 STEAP3Q658P3 488 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FAM53AQ6NSI3 398 aaPredicted RBP5.29□□□□□ -1.56
PSEN1-216ENST00000556066 C18orf65Q6ZTR6 163 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 SLC35E3Q7Z769 313 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 LAX1Q8IWV1 398 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 Q8N1Y9 231 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 KLHL30-AS1Q8NEE0 82 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms