RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ACY3Q96HD9 319 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 OR7D2Q96RA2 312 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 C7orf50Q9BRJ6 194 aaKnown RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 DCUN1D5Q9BTE7 237 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 MND1Q9BWT6 205 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 GNB1LQ9BYB4 327 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 EIF5A2Q9GZV4 153 aaKnown RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 HDHD2Q9H0R4 259 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 SMDT1Q9H4I9 107 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 LRRC19Q9H756 370 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 SPANXB1Q9NS25 103 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 IMP3Q9NV31 184 aaKnown RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 TAS2R9Q9NYW1 312 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF337Q9Y3M9 751 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 HEY1Q9Y5J3 304 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ALG5Q9Y673 324 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 COL4A2P08572 1712 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 A0A1W2PP64 1363 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 NAV1Q8NEY1 1877 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 REREQ9P2R6 1566 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 FABP12A6NFH5 140 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 COCHO43405 550 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 HPGDSO60760 199 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ARL6IP5O75915 188 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 CD7P09564 240 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 LINC00614P0C842 121 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 CBR1P16152 277 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 CSRP1P21291 193 aaKnown RBP1.23□□□□□ -2.21
SCFD1-217ENST00000555953 MIPP30301 263 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 GRPRP30550 384 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 HSPA9P38646 679 aaKnown RBP1.23□□□□□ -2.21
SCFD1-217ENST00000555953 OR1E2P47887 323 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 CLDN12P56749 244 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 MAP3K7CLP57077 242 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 DEFA6Q01524 100 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF117Q03924 483 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 SMAGPQ0VAQ4 97 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 HTR4Q13639 388 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 C4orf26Q17RF5 130 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 DNAL1Q4LDG9 190 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 SPATA31B1PQ5VZV4 182 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 DNM1P34Q6PK57 102 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 DRAM2Q6UX65 266 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF767PQ75MW2 155 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 FAM19A5Q7Z5A7 132 aaPredicted RBP1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF567Q8N184 647 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 RIBC1Q8N443 379 aaPredicted RBP1.23□□□□□ -2.21
SCFD1-217ENST00000555953 OR5C1Q8NGR4 320 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 OR4K13Q8NH42 304 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 OR10A6Q8NH74 314 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ERMNQ8TAM6 284 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 PPCDCQ96CD2 204 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 ABHD14BQ96IU4 210 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 TBX5Q99593 518 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 DHRS9Q9BPW9 319 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 C11orf1Q9H5F2 150 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 PSMD13Q9UNM6 376 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 CHD5Q8TDI0 1954 aa1.23□□□□□ -2.21
SCFD1-217ENST00000555953 SLX4Q8IY92 1834 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 DHRS12A0PJE2 317 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 METTL15A6NJ78 407 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 STK16O75716 305 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 CPMP14384 443 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 CD40LGP29965 261 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 CD79BP40259 229 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 LINC00313P59037 77 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 ACTBP60709 375 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 ACTG1P63261 375 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 MGAT3Q09327 533 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 MED21Q13503 144 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 EBPQ15125 230 aaKnown RBP1.22□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF181Q2M3W8 571 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 TMEM176BQ3YBM2 270 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-217ENST00000555953 LCN8Q6JVE9 175 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 Q6ZS52 159 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 PLCZ1Q86YW0 608 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 CCDC112Q8NEF3 446 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 OR11H1Q8NG94 326 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 SLC37A2Q8TED4 501 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 CYGBQ8WWM9 190 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.22□□□□□ -2.21
SCFD1-217ENST00000555953 SMIM19Q96E16 107 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 PARD6GQ9BYG4 376 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-217ENST00000555953 MROQ9BYG7 248 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 AICDAQ9GZX7 198 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 SLC22A4Q9H015 551 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 PARVAQ9NVD7 372 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 PSORS1C2Q9UIG4 136 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 HHLA2Q9UM44 414 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 NOSIPQ9Y314 301 aaKnown RBP1.22□□□□□ -2.21
SCFD1-217ENST00000555953 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
SCFD1-217ENST00000555953 KDM5BQ9UGL1 1544 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 C1orf232A0A0U1RR37 186 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 ODF3BA8MYP8 253 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 UBFD1O14562 309 aaKnown RBP1.21□□□□□ -2.22
SCFD1-217ENST00000555953 BIRC5O15392 142 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 ATP8B1O43520 1251 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 LY6HO94772 140 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 PSMG1O95456 288 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 ATP5G1P05496 136 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms