RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IFNA21P01568 189 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 CD8AP01732 235 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 SCTP09683 121 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 PI3P19957 117 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 AADACP22760 399 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 CCKARP32238 428 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 CFHR2P36980 270 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 PIGPP57054 158 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 HLA-DRB3P79483 266 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 TNFAIP6P98066 277 aaPredicted RBP5.69□□□□□ -1.5
SLIRP-204ENST00000555890 IFITM2Q01629 132 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 BSPH1Q075Z2 132 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 FBXL19-AS1Q494R0 122 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 IGSF11Q5DX21 431 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 DCAF12L2Q5VW00 463 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 LAMTOR1Q6IAA8 161 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 SLC35E4Q6ICL7 350 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF497Q6ZNH5 498 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 LRP11Q86VZ4 500 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 GAPTQ8N292 157 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 NUDT10Q8NFP7 164 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 OR11H4Q8NGC9 324 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 OR11L1Q8NGX0 322 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 OR10J5Q8NHC4 309 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 LILRB4Q8NHJ6 448 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 THAP6Q8TBB0 222 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 RNASE6Q93091 150 aaKnown RBP5.69□□□□□ -1.5
SLIRP-204ENST00000555890 ERGIC1Q969X5 290 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 NUDT11Q96G61 164 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 MRPL37Q9BZE1 423 aaKnown RBP5.69□□□□□ -1.5
SLIRP-204ENST00000555890 FXYD6Q9H0Q3 95 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 NAA60Q9H7X0 242 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 PLSCR3Q9NRY6 295 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 IL19Q9UHD0 177 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 WIPI2Q9Y4P8 454 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 FXYD6-FXYD2A0A087WZ82 144 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 A0A1W2PPH5 198 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 RFPL4AA6NLU0 287 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SRRM5B3KS81 715 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 RFPL4AL1F8VTS6 287 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 M0R233 179 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 GPR31O00270 319 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 CCSO14618 274 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 WNT9BO14905 357 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 HSPA12AO43301 675 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 TSC22D2O75157 780 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 OR4A8P0C604 315 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SLC25A4P12235 298 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 IRF2P14316 349 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 PRDX2P32119 198 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SNRPD2P62316 118 aaKnown RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SUPT4H1P63272 117 aaKnown RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SRPXP78539 464 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SORDQ00796 357 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 ATXN7L3Q14CW9 347 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 LGALSLQ3ZCW2 172 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 LY6G6FQ5SQ64 297 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 NCMAPQ5T1S8 102 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 C6orf183Q5T699 404 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM65Q6PI78 240 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 TRAT1Q6PIZ9 186 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF767PQ75MW2 155 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 CMTM1Q8IZ96 169 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 BOLLQ8N9W6 283 aaKnown RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 PLPPR1Q8TBJ4 325 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 RTN4IP1Q8WWV3 396 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-204ENST00000555890 AJUBAQ96IF1 538 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SEC22AQ96IW7 307 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 OR2V2Q96R30 315 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SUCNR1Q9BXA5 334 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 NMES1Q9C002 83 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 EGLN1Q9GZT9 426 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 SLC5A7Q9GZV3 580 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 RNF7Q9UBF6 113 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 DNAJB11Q9UBS4 358 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 HERC1Q15751 4861 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 DYSFO75923 2080 aa5.68□□□□□ -1.5
SLIRP-204ENST00000555890 TRBV6-7A0A0A0MS04 114 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 A0A0D9SG52 128 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 OOEPA6NGQ2 149 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 LRRC30A6NM36 301 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 NPIPB11E5RHQ5 1161 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 G3V3Q6 166 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 MPPED1O15442 326 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 ARPC5O15511 151 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 IGHV1-46P01743 117 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 ADH4P08319 380 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 PET100P0DJ07 73 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 PSG2P11465 335 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 RPS2P15880 293 aaKnown RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 PSMB6P28072 239 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 NUP62P37198 522 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 CEBPDP49716 269 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 LUMP51884 338 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 PTTG1IPP53801 180 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 RND3P61587 244 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms