RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 F5H5K5 113 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 PHYHO14832 338 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 FABP7O15540 132 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 TNFAIP8O95379 198 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 CRYGDP07320 174 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 GIMD1P0DJR0 217 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 CTSEP14091 401 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 CD36P16671 472 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 RPA3P35244 121 aaPredicted RBP0.71□□□□□ -2.3
SCFD1-216ENST00000555550 MAGEA12P43365 314 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 DLX6P56179 175 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 RWDD2BP57060 319 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 ZNF117Q03924 483 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 OR8G1Q15617 311 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 MESTQ5EB52 335 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 SPATA31B1PQ5VZV4 182 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 LRRC6Q86X45 466 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 LFNGQ8NES3 379 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 OR9I1Q8NGQ6 314 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 HAVCR2Q8TDQ0 301 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 TMBIM1Q969X1 311 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 TAMM41Q96BW9 452 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 CATSPER2Q96P56 530 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 TBX5Q99593 518 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 FAAP24Q9BTP7 215 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 MED10Q9BTT4 135 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 TAPBPLQ9BX59 468 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 UBQLN4Q9NRR5 601 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 KIAA1109Q2LD37 5005 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 THSD7AQ9UPZ6 1657 aa0.71□□□□□ -2.3
SCFD1-216ENST00000555550 REREQ9P2R6 1566 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 FTCDNL1E5RQL4 147 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 F5H768 121 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 F8VZ95 297 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 UBDO15205 165 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 ENSAO43768 121 aaKnown RBP0.7□□□□□ -2.3
SCFD1-216ENST00000555550 IGLV3-27P01718 113 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 OR4A8P0C604 315 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 C8orf88P0DMB2 117 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 IGHV3-30-3P0DP02 117 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 SPNP16150 400 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 ZNF3P17036 446 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 ALOX5APP20292 161 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 G6PCP35575 357 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 HINT1P49773 126 aaPredicted RBP0.7□□□□□ -2.3
SCFD1-216ENST00000555550 DAPP51397 102 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 PSMD7P51665 324 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 MP68P56378 58 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 SKP2Q13309 424 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 FLOT2Q14254 428 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 TMEM75Q8N9X5 138 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 OR4X2Q8NGF9 303 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 OR52E4Q8NGH9 312 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 OR11L1Q8NGX0 322 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 OR5AK3PQ8NH89 298 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 RNASE6Q93091 150 aaKnown RBP0.7□□□□□ -2.3
SCFD1-216ENST00000555550 CCDC127Q96BQ5 260 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 PPCDCQ96CD2 204 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 UPF3BQ9BZI7 483 aaKnown RBP0.7□□□□□ -2.3
SCFD1-216ENST00000555550 SLC22A4Q9H015 551 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 C11orf1Q9H5F2 150 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 C11orf49Q9H6J7 331 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 PLEKHJ1Q9NW61 149 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 TXNL4BQ9NX01 149 aaKnown RBP0.7□□□□□ -2.3
SCFD1-216ENST00000555550 POMPQ9Y244 141 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 NPATQ14207 1427 aa0.7□□□□□ -2.3
SCFD1-216ENST00000555550 KMT2DO14686 5537 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 CHD2O14647 1828 aaKnown RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 CHD5Q8TDI0 1954 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 PKD1L2Q7Z442 2459 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 TRAV8-2A0A0B4J237 113 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 ARRDC5A6NEK1 342 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 GOLGA6L10A6NI86 522 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 SULT1C2O00338 296 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 CETN3O15182 167 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 HLA-DRAP01903 254 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 ATP5G1P05496 136 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 NQO1P15559 274 aaKnown RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 HIST1H1CP16403 213 aaKnown RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 MIPP30301 263 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 OPRM1P35372 400 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 RAB8AP61006 207 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 SKP1P63208 163 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 PAFAH1B3Q15102 231 aaKnown RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 LGALS9BQ3B8N2 356 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 FAM229BQ4G0N7 80 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 CDKL4Q5MAI5 379 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 LGALS9CQ6DKI2 356 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 EBLN2Q6P2I7 272 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 DNM1P34Q6PK57 102 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 SDIM1Q6ZPB5 146 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 PLCZ1Q86YW0 608 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 GPR32P1Q8NGA4 272 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 STOML3Q8TAV4 291 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 SMIM19Q96E16 107 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 MRPS24Q96EL2 167 aaKnown RBP0.69□□□□□ -2.3
SCFD1-216ENST00000555550 MS4A6AQ9H2W1 248 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 NDUFB11Q9NX14 153 aa0.69□□□□□ -2.3
SCFD1-216ENST00000555550 KLK5Q9Y337 293 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms