RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 H3BPC8 53 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 SULT1C2O00338 296 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 SLC17A3O00476 420 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 TXNDC9O14530 226 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 CDIPTO14735 213 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 FABP7O15540 132 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ZMPSTE24O75844 475 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 LDOC1O95751 146 aaPredicted RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 EPPINO95925 133 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 OR13C7P0DN81 318 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 PRB4P10163 310 aaPredicted RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 DEFA4P12838 97 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 G6PCP35575 357 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 CCR2P41597 374 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 PSMB3P49720 205 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 TSPEAR-AS2P59090 65 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 TSPAN5P62079 268 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ZNF90Q03938 601 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 XRCC4Q13426 336 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 RAB31Q13636 194 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 FLOT2Q14254 428 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 PSG3Q16557 428 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 BSXQ3C1V8 233 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 SLC36A2Q495M3 483 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 FAM162BQ5T6X4 162 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 DRAM2Q6UX65 266 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ATP5L2Q7Z4Y8 100 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 LHFPL1Q86WI0 220 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 OR11H2Q8NH07 326 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 FAM45AQ8TCE6 357 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 RPS4Y2Q8TD47 263 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 MITD1Q8WV92 249 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 CCDC127Q96BQ5 260 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ABHD14BQ96IU4 210 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ACBD6Q9BR61 282 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ZNF426Q9BUY5 554 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 CDCA4Q9BXL8 241 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 NCOR1P1Q9H4R4 102 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 SLC2A9Q9NRM0 540 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ENPP5Q9UJA9 477 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 KLK5Q9Y337 293 aaPredicted RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 MRPS16Q9Y3D3 137 aaKnown RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 PLCH2O75038 1416 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ZFHX2Q9C0A1 2572 aaPredicted RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 BRWD1Q9NSI6 2320 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 ZNF469Q96JG9 3925 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 TNIKQ9UKE5 1360 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 MAST2Q6P0Q8 1798 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 DENND4CQ5VZ89 1909 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 CEP192Q8TEP8 1941 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 DICER1Q9UPY3 1922 aaKnown RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 IGKV2-40A0A087WW87 121 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 TRBV6-5A0A0K0K1A5 114 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 OR5K4A6NMS3 321 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 ADAP1O75689 374 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 STK16O75716 305 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 SNAI1O95863 264 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 OTCP00480 354 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 IGKV2D-40P01614 121 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 CCDC172P0C7W6 258 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 SFTPCP11686 197 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 CRYBB3P26998 211 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 OR10A3P58181 314 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 FAM3AP98173 230 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 C1DQ13901 141 aaKnown RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 CDK5R1Q15078 307 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 PAFAH1B3Q15102 231 aaKnown RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 ZNF791Q3KP31 576 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 HSP90B2PQ58FF3 399 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 Q6ZTI0 123 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 DAND5Q8N907 189 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 CNEP1R1Q8N9A8 125 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 OR4P4Q8NGL7 312 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 OR5J2Q8NH18 312 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 ANGPTL6Q8NI99 470 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 Q96M85 177 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 NMNAT3Q96T66 252 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 TBX5Q99593 518 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 MED10Q9BTT4 135 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 TTTY13Q9BZ97 58 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 MED28Q9H204 178 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 CST9LQ9H4G1 147 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 C11orf1Q9H5F2 150 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 SOX21Q9Y651 276 aaPredicted RBP0.35□□□□□ -2.35
SRP54-207ENST00000555535 ZNF532Q9HCE3 1301 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 TECTAO75443 2155 aa0.35□□□□□ -2.35
SRP54-207ENST00000555535 LAMB4A4D0S4 1761 aa0.34□□□□□ -2.35
SRP54-207ENST00000555535 TNRC6BQ9UPQ9 1833 aaKnown RBP0.34□□□□□ -2.35
SRP54-207ENST00000555535 IGKV3D-7A0A0C4DH55 119 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 IGKV3OR2-268A0A0C4DH90 116 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GSTTP1A0A1W2PQM5 241 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 GRIFINA4D1Z8 144 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 TMEM235A6NFC5 223 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 M0QYV0 167 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 MRASO14807 208 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 ZNF737O75373 536 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 ARL6IP5O75915 188 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 PSMG1O95456 288 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 IGHV1-69P01742 117 aa0.34□□□□□ -2.36
SRP54-207ENST00000555535 ZNF705DP0CH99 300 aaPredicted RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms