RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ALOX5APP20292 161 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 TGFBR2P37173 567 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 SKP2Q13309 424 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 IGFBP7Q16270 282 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 LRRC75BQ2VPJ9 315 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 LGALSLQ3ZCW2 172 aaPredicted RBP2.82□□□□□ -1.96
VRK1-205ENST00000555402 FAM162BQ5T6X4 162 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 SPNS3Q6ZMD2 512 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 CLEC20AQ6ZU45 233 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 GID4Q8IVV7 300 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 MUC15Q8N387 334 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 CLDN22Q8N7P3 220 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 ZIC4Q8N9L1 334 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 CYGBQ8WWM9 190 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 ASB17Q8WXJ9 295 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 RTBDNQ9BSG5 229 aaPredicted RBP2.82□□□□□ -1.96
VRK1-205ENST00000555402 PECRQ9BY49 303 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 MROQ9BYG7 248 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 TRABDQ9H4I3 376 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 GLTPQ9NZD2 209 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 IGHV1-45A0A0A0MS14 117 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 A0A0B4J2C4 111 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 PSMD12O00232 456 aaPredicted RBP2.81□□□□□ -1.96
VRK1-205ENST00000555402 IGKV1D-33P01593 117 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 IGKV1-33P01594 117 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 GABRA1P14867 456 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 CNTFRP26992 372 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 CD34P28906 385 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 LAIR2Q6ISS4 152 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 SLC51BQ86UW2 128 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 NIT1Q86X76 327 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 EEF1AKMT1Q8WVE0 214 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 IMP4Q96G21 291 aaKnown RBP2.81□□□□□ -1.96
VRK1-205ENST00000555402 PHB2Q99623 299 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 EBPLQ9BY08 206 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 ASF1BQ9NVP2 202 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 LSM5Q9Y4Y9 91 aaKnown RBP2.81□□□□□ -1.96
VRK1-205ENST00000555402 CLUHO75153 1309 aa2.81□□□□□ -1.96
VRK1-205ENST00000555402 PLXNB3Q9ULL4 1909 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 PTPRKQ15262 1439 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 ZNF532Q9HCE3 1301 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 POP7O75817 140 aaKnown RBP2.8□□□□□ -1.96
VRK1-205ENST00000555402 LINC00614P0C842 121 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 CXCL3P19876 107 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 CRABP2P29373 138 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 NAA20P61599 178 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 SLC35A2P78381 396 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 RPL19P84098 196 aaKnown RBP2.8□□□□□ -1.96
VRK1-205ENST00000555402 RSU1Q15404 277 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 HIST3H3Q16695 136 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 OR10K2Q6IF99 312 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 LYG2Q86SG7 212 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 TAC4Q86UU9 113 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 TMEM161BQ8NDZ6 487 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 OR51D1Q8NGF3 324 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 OR10X1Q8NGY0 326 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 MFSD8Q8NHS3 518 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 MAL2Q969L2 176 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 TAMM41Q96BW9 452 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 REEP6Q96HR9 211 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 HOPXQ9BPY8 73 aaPredicted RBP2.8□□□□□ -1.96
VRK1-205ENST00000555402 CHST5Q9GZS9 411 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 ZNF586Q9NXT0 402 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 VPS29Q9UBQ0 182 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 POLR1DQ9Y2S0 133 aa2.8□□□□□ -1.96
VRK1-205ENST00000555402 CHD2O14647 1828 aaKnown RBP2.79□□□□□ -1.96
VRK1-205ENST00000555402 CCDC144AA2RUR9 1427 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 ZBED9Q6R2W3 1325 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 GNG14A0A1W2PPG7 69 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 A6NED7 52 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 ARGFXA6NJG6 315 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 A8MWP4 228 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 EVPLLA8MZ36 301 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 C2orf74A8MZ97 194 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 IGHMP01871 453 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 MIPP30301 263 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 SPCS3P61009 180 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 RAB2AP61019 212 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 GTF2BQ00403 316 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 KRR1Q13601 381 aaKnown RBP2.79□□□□□ -1.96
VRK1-205ENST00000555402 C1DQ13901 141 aaKnown RBP2.79□□□□□ -1.96
VRK1-205ENST00000555402 ALX1Q15699 326 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 MOGQ16653 247 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 DEFB134Q4QY38 66 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 ACSBG2Q5FVE4 666 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 SPATA31B1PQ5VZV4 182 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 TMEM42Q69YG0 159 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 DHRS4L2Q6PKH6 230 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 TMED4Q7Z7H5 227 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 NAA40Q86UY6 237 aa2.79□□□□□ -1.96
VRK1-205ENST00000555402 LRRC25Q8N386 305 aaPredicted RBP2.79□□□□□ -1.96
VRK1-205ENST00000555402 OR11L1Q8NGX0 322 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms