RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 NFYAP23511 347 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 IL3RAP26951 378 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 FCGR2CP31995 323 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 HRH1P35367 487 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 TAS2R19P59542 299 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF816Q0VGE8 651 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 FAM71F2Q6NXP2 309 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 OR5H2Q8NGV7 314 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 S100ZQ8WXG8 99 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 TRIM63Q969Q1 353 aa10.24□□□□□ -0.77
SYNE2-219ENST00000555323 SDHCQ99643 169 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 NSD1Q96L73 2696 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-219ENST00000555323 ANKRD20A5PA0PJZ0 165 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 CD3DP04234 171 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 CSF1P09603 554 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 OR8U9P0C7N5 309 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 IER3P46695 156 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 RNASE12Q5GAN4 147 aaKnown RBP10.23□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF833PQ6ZTB9 187 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 OR8H3Q8N146 312 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 LYG1Q8N1E2 194 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 TMEM86BQ8N661 226 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 SIGLECL1Q8N7X8 197 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-219ENST00000555323 OR6F1Q8NGZ6 308 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 OR8U1Q8NH10 309 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 PIFOQ8TCI5 191 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-219ENST00000555323 DEDD2Q8WXF8 326 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 RPEQ96AT9 228 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 ABHD14BQ96IU4 210 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 OCEL1Q9H607 264 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 HILPDAQ9Y5L2 63 aa10.23□□□□□ -0.77
SYNE2-219ENST00000555323 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 A0A1W2PPI3 338 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 CLDN34H7C241 214 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 HSD17B6O14756 317 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 TXNL1O43396 289 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 SLC22A5O76082 557 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 PPYP01298 95 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 LUMP51884 338 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 PPP5CP53041 499 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 HILS1P60008 231 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 MSMO1Q15800 293 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 BAK1Q16611 211 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 RNASE10Q5GAN6 216 aaKnown RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 STEAP1BQ6NZ63 245 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 RBMS3Q6XE24 437 aaKnown RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 ARRDC1Q8N5I2 433 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 RTN4IP1Q8WWV3 396 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 SSX3Q99909 188 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF221Q9UK13 617 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 RNF150Q9ULK6 438 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 POMT1Q9Y6A1 747 aa10.22□□□□□ -0.77
SYNE2-219ENST00000555323 ZFHX3Q15911 3703 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 IGKV1D-13A0A0B4J2D9 117 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 RAB3DO95716 219 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 IGLV2-14P01704 120 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF735P0CB33 412 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 AKAIN1P0CW23 69 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 SAA2P0DJI9 122 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-219ENST00000555323 IGKV1-13P0DP09 117 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 AADACP22760 399 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 PAX6P26367 422 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 CD40LGP29965 261 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 BRS3P32247 399 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 ARHGDIBP52566 201 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 KLF9Q13886 244 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-219ENST00000555323 MEF2DQ14814 521 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 LRRC75BQ2VPJ9 315 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 LHFPL1Q86WI0 220 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 TGIF2LXQ8IUE1 241 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 OR4D10Q8NGI6 311 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 SSMEM1Q8WWF3 244 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 CFHR4Q92496 578 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 TOMM40LQ969M1 308 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 MOB3AQ96BX8 217 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 JMJD8Q96S16 334 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 S1PR3Q99500 378 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 ZNF2Q9BSG1 426 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-219ENST00000555323 DPAGT1Q9H3H5 408 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 SDHAF2Q9NX18 166 aa10.21□□□□□ -0.77
SYNE2-219ENST00000555323 MXRA5Q9NR99 2828 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 M0QYG6 137 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-219ENST00000555323 TCF21O43680 179 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 IFNA2P01563 188 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms