RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ZNRD1Q9P1U0 126 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 PCYT1BQ9Y5K3 369 aaPredicted RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 LOXHD1Q8IVV2 1947 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 PLXNB3Q9ULL4 1909 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 YLPM1P49750 1951 aaKnown RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 WRNQ14191 1432 aaPredicted RBP eCLIP3.39□□□□□ -1.87
VRK1-203ENST00000555067 A8MWL6 223 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 BHLHE40O14503 412 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 STK16O75716 305 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 CNTFRP26992 372 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 HERVK_113P63121 156 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 HIST1H3AP68431 136 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 H3F3AP84243 136 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 PYCR3Q53H96 274 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 EBLN2Q6P2I7 272 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 CYHR1Q6ZMK1 362 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 C2orf15Q8WU43 125 aaKnown RBP3.39□□□□□ -1.87
VRK1-203ENST00000555067 ZNF799Q96GE5 643 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 SLC25A44Q96H78 314 aaPredicted RBP3.39□□□□□ -1.87
VRK1-203ENST00000555067 OR2V2Q96R30 315 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 CHCHD7Q9BUK0 85 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 KIFC1Q9BW19 673 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 PCBD2Q9H0N5 130 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 C21orf62Q9NYP8 219 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 SMPXQ9UHP9 88 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 TIMM22Q9Y584 194 aa3.39□□□□□ -1.87
VRK1-203ENST00000555067 FHAD1B1AJZ9 1412 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 IGHV1-45A0A0A0MS14 117 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 TRAV8-1A0A0A6YYK1 113 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 A0A1B0GV72 72 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 TMEM223A0PJW6 202 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 OR4C46A6NHA9 309 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 INMT-MINDY4F8WBC2 141 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 ZNF207O43670 478 aaKnown RBP3.38□□□□□ -1.87
VRK1-203ENST00000555067 POP7O75817 140 aaKnown RBP3.38□□□□□ -1.87
VRK1-203ENST00000555067 OR7C1O76099 320 aaPredicted RBP3.38□□□□□ -1.87
VRK1-203ENST00000555067 CD28P10747 220 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 CXCL12P48061 93 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 LINC00313P59037 77 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 TAS2R41P59536 307 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 TNFRSF9Q07011 255 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 LAIR2Q6ISS4 152 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 IGFL3Q6UXB1 125 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 WDR86Q86TI4 376 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 MAL2Q969L2 176 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 OR52E6Q96RD3 313 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 MED28Q9H204 178 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 CMTM6Q9NX76 183 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 ZNF492Q9P255 531 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 OPTCQ9UBM4 332 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 ANKRD12Q6UB98 2062 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 NACADO15069 1562 aa3.38□□□□□ -1.87
VRK1-203ENST00000555067 DHX57Q6P158 1386 aaKnown RBP3.38□□□□□ -1.87
VRK1-203ENST00000555067 TMED7-TICAM2A0A0A6YYA0 188 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 FAM236DA0A1B0GTK5 79 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 LTAP01374 205 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 TTRP02766 147 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 FAM236CP0DP71 79 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 RPL5P46777 297 aaKnown RBP3.37□□□□□ -1.87
VRK1-203ENST00000555067 ARHGAP11BQ3KRB8 267 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 SP6Q3SY56 376 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 ZNF678Q5SXM1 525 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 LPCAT3Q6P1A2 487 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 ZFP1Q6P2D0 407 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 SBSNQ6UWP8 590 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 TMEM144Q7Z5S9 345 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 LHFPL5Q8TAF8 219 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 GPR82Q96P67 336 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 TSSK6Q9BXA6 273 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 ZNF355PQ9NSJ1 428 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 MRPL27Q9P0M9 148 aaKnown RBP3.37□□□□□ -1.87
VRK1-203ENST00000555067 PXMP4Q9Y6I8 212 aa3.37□□□□□ -1.87
VRK1-203ENST00000555067 SVILO95425 2214 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 TRBV6-6A0A0A6YYG2 114 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ZNF850A8MQ14 1090 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 M0R381 172 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 FAAHO00519 579 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ZNF861PO60384 105 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 CRYGDP07320 174 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 FAM228BP0C875 321 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 FGF6P10767 208 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 HIST1H1TP22492 207 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 NUDT2P50583 147 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 DEFA6Q01524 100 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 SMIM20Q8N5G0 67 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 OR10G2Q8NGC3 310 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 LINC01560Q8TB33 94 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ITLN2Q8WWU7 325 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 RASSF5Q8WWW0 418 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 TBL1YQ9BQ87 522 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ULBP3Q9BZM4 244 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ALX4Q9H161 411 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 ZNF430Q9H8G1 570 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 C19orf12Q9NSK7 152 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms