RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ASCL3Q9NQ33 180 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 APC2O95996 2303 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 SIGLEC5O15389 551 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 MT-ND6P03923 174 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 CD74P04233 296 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 FABP2P12104 132 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
VTI1B-204ENST00000554659 SIGLEC14Q08ET2 396 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 CLDN18P56856 261 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 MEF2BQ02080 365 aaPredicted RBP12.09□□□□□ -0.47
VTI1B-204ENST00000554659 FHL5Q5TD97 284 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 FAM206AQ9NX38 181 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 AGFG2O95081 481 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 CD3EP07766 207 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 RELBQ01201 579 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
VTI1B-204ENST00000554659 OR51B2Q9Y5P1 312 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 PRF1P14222 555 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
VTI1B-204ENST00000554659 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
VTI1B-204ENST00000554659 ADIPOQQ15848 244 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SPATA45Q537H7 98 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 MPTX1A8MV57 137 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 APELAP0DMC3 54 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 RHOVQ96L33 236 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 TLNRD1Q9H1K6 362 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 FSCN3Q9NQT6 498 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 GCGP01275 180 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF488Q96MN9 340 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
VTI1B-204ENST00000554659 HBZP02008 142 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 MIEN1Q9BRT3 115 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 OR2J1Q9GZK6 312 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
VTI1B-204ENST00000554659 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.07□□□□□ -0.48
VTI1B-204ENST00000554659 DHRS7CA6NNS2 312 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 C4orf51C9J302 202 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 C1QL1O75973 258 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 KIR2DL2P43627 348 aaPredicted RBP12.07□□□□□ -0.48
VTI1B-204ENST00000554659 COL10A1Q03692 680 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 MESP2Q0VG99 397 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 GBGT1Q8N5D6 347 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 OR5R1Q8NH85 324 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 WIPI2Q9Y4P8 454 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 UBR3Q6ZT12 1888 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
VTI1B-204ENST00000554659 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 C1RLQ9NZP8 487 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 LINC01590Q5TEZ4 76 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 CTHRC1Q96CG8 243 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF324O75467 553 aaPredicted RBP12.07□□□□□ -0.48
VTI1B-204ENST00000554659 DCAF10Q5QP82 559 aa12.07□□□□□ -0.48
VTI1B-204ENST00000554659 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 LMX1BO60663 402 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PRDX2P32119 198 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PRNTQ86SH4 94 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 SLC22A18ASQ8N1D0 253 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 MARS2Q96GW9 593 aaKnown RBP12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 G6PC2Q9NQR9 355 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 LHFPL6Q9Y693 200 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 SCTP09683 121 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 NAT2P11245 290 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF645Q8N7E2 425 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 A6NJY4 79 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 CD8AP01732 235 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 COX6CP09669 75 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 DDTP30046 118 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 C12orf54Q6X4T0 127 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 IGHMP01871 453 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 ZXDCQ2QGD7 858 aaPredicted RBP12.06□□□□□ -0.48
VTI1B-204ENST00000554659 SMRP1Q8NCR6 262 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 TAF15Q92804 592 aaKnown RBP eCLIP12.06□□□□□ -0.48
VTI1B-204ENST00000554659 OR51M1Q9H341 326 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 IGHV3-21A0A0B4J1V1 117 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 MGST3O14880 152 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PGLYRP1O75594 196 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms