RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GPER1Q99527 375 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 HES4Q9HCC6 221 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 DAPP1Q9UN19 280 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 LHFPL6Q9Y693 200 aa8.13□□□□□ -1.11
SIX4-202ENST00000554079 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 DEGS1O15121 323 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
SIX4-202ENST00000554079 AGFG2O95081 481 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 ZNF17P17021 662 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TIMP3P35625 211 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 IER3P46695 156 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 ZNF90Q03938 601 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 CHRDL2Q6WN34 429 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 DGAT2L6Q6ZPD8 337 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 ZNF695Q8IW36 515 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 OR8B3Q8NGG8 313 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 NINJ1Q92982 152 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 BORCS7Q96B45 105 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 NUS1Q96E22 293 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 OR8B2Q96RD0 313 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TAAR6Q96RI8 345 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 CHRDL1Q9BU40 450 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 GNB1LQ9BYB4 327 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 ST20Q9HBF5 79 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 CENPMQ9NSP4 180 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 DNAH12Q6ZR08 3092 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TSPAN13O95857 204 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 NAPSAO96009 420 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 IGHMP01871 453 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 HLA-DRB1P01911 266 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 EGR1P18146 543 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 GUCA1AP43080 201 aaPredicted RBP8.12□□□□□ -1.11
SIX4-202ENST00000554079 CA7P43166 264 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 METAP1P53582 386 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 HSD52Q0P140 79 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TRIP6Q15654 476 aaKnown RBP8.12□□□□□ -1.11
SIX4-202ENST00000554079 SRSF7Q16629 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
SIX4-202ENST00000554079 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 EBLN2Q6P2I7 272 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 ACSM6Q6P461 480 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 RAB42Q8N4Z0 105 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 OR4C3Q8NH37 302 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 NT5CQ8TCD5 201 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 DERL1Q9BUN8 251 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 COMMD5Q9GZQ3 224 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TXNIPQ9H3M7 391 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 PLEK2Q9NYT0 353 aa8.12□□□□□ -1.11
SIX4-202ENST00000554079 TRBV20OR9-2A0A075B6H5 130 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 C7orf71A4D174 169 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 LIPT2A6NK58 231 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 C11orf94C9JXX5 98 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 LATO43561 262 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 EOMESO95936 686 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 ZNF823P16415 610 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 SSTR5P35346 364 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 FNDC7Q5VTL7 733 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 OR4A5Q8NH83 315 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 NAT6Q93015 286 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 FER1L6-AS2Q96M78 137 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 ULBP2Q9BZM5 246 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 STRADBQ9C0K7 418 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 FNDC4Q9H6D8 234 aaPredicted RBP8.11□□□□□ -1.11
SIX4-202ENST00000554079 PLEKHJ1Q9NW61 149 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
SIX4-202ENST00000554079 NCOA6Q14686 2063 aaPredicted RBP8.11□□□□□ -1.11
SIX4-202ENST00000554079 SLC22A20A6NK97 555 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 VSTM5A8MXK1 200 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 GPR75O95800 540 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 CTGFP29279 349 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 EIF3IQ13347 325 aaKnown RBP8.1□□□□□ -1.11
SIX4-202ENST00000554079 DEFB134Q4QY38 66 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 Q56UQ5 140 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 PRAMEF5Q5TYX0 476 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 BRICD5Q6PL45 260 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 GATSQ8NAP1 163 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 TAF15Q92804 592 aaKnown RBP eCLIP8.1□□□□□ -1.11
SIX4-202ENST00000554079 MBD6Q96DN6 1003 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 PHF7Q9BWX1 381 aaPredicted RBP8.1□□□□□ -1.11
SIX4-202ENST00000554079 GP6Q9HCN6 339 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 UBE2J1Q9Y385 318 aaPredicted RBP8.1□□□□□ -1.11
SIX4-202ENST00000554079 A0A0G2JMM0 328 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 A0A1W2PPB8 328 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 KIR3DP1A8MWS1 328 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 B3GALT2O43825 422 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 NTF3P20783 257 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 VDAC1P21796 283 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 NPY1RP25929 384 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 PLP1P60201 277 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 UBE2G1P62253 170 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 PSG7Q13046 419 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 ZNF776Q68DI1 518 aaPredicted RBP8.1□□□□□ -1.11
SIX4-202ENST00000554079 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms