RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 BRS3P32247 399 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 NHLRC3Q5JS37 347 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR2A7Q96R45 310 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 DDA1Q9BW61 102 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 SLC2A8Q9NY64 477 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNF98A6NK75 572 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 PGLYRP1O75594 196 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 COX6A1P12074 109 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 LGALS7P47929 136 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 C16orf82Q7Z2V1 217 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 MARS2Q96GW9 593 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 LOXL4Q96JB6 756 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 SLC25A10Q9UBX3 287 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PR77 199 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 C17orf51A8MQB3 221 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 CSN3P07498 182 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 FAM87AP0C7U9 286 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 STARD6P59095 220 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 P2RY6Q15077 328 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 NSUN5P2Q63ZY6 315 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR5AU1Q8NGC0 362 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 COA4Q9NYJ1 87 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 IER3P46695 156 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 PKIBQ9C010 78 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 GSX1Q9H4S2 264 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 M0R143 59 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNF596Q8TC21 504 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 CHRNA10Q9GZZ6 450 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 HEXA-AS1Q9H8Q6 139 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 PCOLCEQ15113 449 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 C1RLQ9NZP8 487 aa13.22□□□□□ -0.29
ARHGEF40-202ENST00000553709 CDX4O14627 284 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 SPSB2Q99619 263 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 NAGKQ9UJ70 344 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PPIAL4EA0A075B759 164 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PPIAL4DF5H284 164 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 BMPR1BO00238 502 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PPIAL4FP0DN26 164 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNF383Q8NA42 475 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 SRXN1Q9BYN0 137 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 TMEM191AQ9H0A3 160 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 TMEM74BQ9NUR3 256 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PPIAL4AQ9Y536 164 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 SPTBP11277 2137 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 TSC2P49815 1807 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 K7N7A8 449 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 CYB5R3P00387 301 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 Q6ZN92 141 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PRDM14Q9GZV8 571 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 CLEC5AQ9NY25 188 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 DLL3Q9NYJ7 618 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 PILRBQ9UKJ0 227 aa13.21□□□□□ -0.29
ARHGEF40-202ENST00000553709 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.3
ARHGEF40-202ENST00000553709 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF40-202ENST00000553709 SAXO1Q8IYX7 474 aa13.21□□□□□ -0.3
ARHGEF40-202ENST00000553709 SELENOHQ8IZQ5 122 aaKnown RBP13.21□□□□□ -0.3
ARHGEF40-202ENST00000553709 AICDAQ9GZX7 198 aa13.21□□□□□ -0.3
ARHGEF40-202ENST00000553709 F5H697 171 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 REG1BP48304 166 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 Q8WTZ3 238 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 GPR146Q96CH1 333 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 BET1LQ9NYM9 111 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 PXMP4Q9Y6I8 212 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 A0A0G2JK05 382 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 MPDU1O75352 247 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 RIGQ13278 110 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 C10orf128Q5T292 105 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 IL19Q9UHD0 177 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 SMPD2O60906 423 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 MPV17P39210 176 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 RTP5Q14D33 572 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR52M1Q8NGK5 317 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 WNT5BQ9H1J7 359 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 OPN3Q9H1Y3 402 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 CCL8P80075 99 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMEM97Q5BJF2 176 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 C1orf185Q5T7R7 199 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 LDLRAD3Q86YD5 345 aa13.2□□□□□ -0.3
ARHGEF40-202ENST00000553709 SEMA7AO75326 666 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 COX5BP10606 129 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 WNT5AP41221 380 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 CD81P60033 236 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 Q1RN00 199 aa13.19□□□□□ -0.3
ARHGEF40-202ENST00000553709 SGMS2Q8NHU3 365 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms