RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 RBM7Q9Y580 266 aaKnown RBP17.33■□□□□ 0.36
NEK3-202ENST00000550841 CLDN34H7C241 214 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 HOXA3O43365 443 aaPredicted RBP17.32■□□□□ 0.36
NEK3-202ENST00000550841 FCER2P06734 321 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 OR5H8P0DN80 308 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 ETV6P41212 452 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 ZNF816Q0VGE8 651 aaPredicted RBP17.32■□□□□ 0.36
NEK3-202ENST00000550841 ACTBL2Q562R1 376 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 LINC00299Q6ZSB3 139 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 DYNAPQ8N1N2 210 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 ST6GALNAC6Q969X2 333 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 S1PR3Q99500 378 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 KLK11Q9UBX7 282 aa17.32■□□□□ 0.36
NEK3-202ENST00000550841 ZNF107Q9UII5 783 aaPredicted RBP17.32■□□□□ 0.36
NEK3-202ENST00000550841 HSD17B6O14756 317 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 ST8SIA5O15466 376 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 GSTZ1O43708 216 aaPredicted RBP17.31■□□□□ 0.36
NEK3-202ENST00000550841 LANCL1O43813 399 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 FAM71F2Q6NXP2 309 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 LYSMD2Q8IV50 215 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 SMIM4Q8WVI0 70 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 AGMATQ9BSE5 352 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 GAB2Q9UQC2 676 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 OR2W1Q9Y3N9 320 aa17.31■□□□□ 0.36
NEK3-202ENST00000550841 FBN1P35555 2871 aaKnown RBP17.3■□□□□ 0.36
NEK3-202ENST00000550841 TRIM77I1YAP6 450 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 HLA-DMAP28067 261 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 GPR12P47775 334 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 DGCR2P98153 550 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 SLC9A3R2Q15599 337 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 PYDC2Q56P42 97 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 RNASE12Q5GAN4 147 aaKnown RBP17.3■□□□□ 0.36
NEK3-202ENST00000550841 OVCH2Q7RTZ1 564 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 TGIF2LXQ8IUE1 241 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 ZDHHC22Q8N966 263 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 GIMAP1Q8WWP7 306 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 PARP12Q9H0J9 701 aaKnown RBP17.3■□□□□ 0.36
NEK3-202ENST00000550841 IFI27L2Q9H2X8 130 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
NEK3-202ENST00000550841 DNAJC9-AS1A6NH13 148 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 ZNF736B4DX44 427 aaPredicted RBP17.29■□□□□ 0.36
NEK3-202ENST00000550841 SLC22A5O76082 557 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 VENTXO95231 258 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 IGHV4-59P01825 116 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 PMP2P02689 132 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 OR8U9P0C7N5 309 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 TBPP20226 339 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 NFYAP23511 347 aaPredicted RBP17.29■□□□□ 0.36
NEK3-202ENST00000550841 FCGR2CP31995 323 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 LUMP51884 338 aaPredicted RBP17.29■□□□□ 0.36
NEK3-202ENST00000550841 DYRK1AQ13627 763 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 PLA1AQ53H76 456 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 ODF3L1Q8IXM7 274 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 TMEM229BQ8NBD8 167 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.29■□□□□ 0.36
NEK3-202ENST00000550841 OR8U1Q8NH10 309 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 RTN4IP1Q8WWV3 396 aaPredicted RBP17.29■□□□□ 0.36
NEK3-202ENST00000550841 EHFQ9NZC4 300 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 PITPNC1Q9UKF7 332 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 RNF150Q9ULK6 438 aa17.29■□□□□ 0.36
NEK3-202ENST00000550841 MXRA5Q9NR99 2828 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 IGHV1-3A0A0C4DH29 117 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 H3BUX3 64 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 TUSC2O75896 110 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 CSF1P09603 554 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 PAX6P26367 422 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 HRH1P35367 487 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 TAS2R19P59542 299 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 DHRS11Q6UWP2 260 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 ZNF833PQ6ZTB9 187 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 MOB3BQ86TA1 216 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 THNSL2Q86YJ6 484 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 ZFAND2BQ8WV99 257 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 ABHD14BQ96IU4 210 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 ESM1Q9NQ30 184 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 V9GYH0 126 aa17.28■□□□□ 0.36
NEK3-202ENST00000550841 SAA2-SAA4A0A096LPE2 208 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 IFNA6P05013 189 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 FAM106CPP0CH98 169 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 SAA2P0DJI9 122 aaPredicted RBP17.27■□□□□ 0.36
NEK3-202ENST00000550841 RFX2P48378 723 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 TSPAN5P62079 268 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 UBA52P62987 128 aaKnown RBP17.27■□□□□ 0.36
NEK3-202ENST00000550841 ZNF45Q02386 682 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 DIAPH2-AS1Q14236 149 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 C16orf87Q6PH81 154 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 LIAT1Q6ZQX7 453 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 OR6F1Q8NGZ6 308 aa17.27■□□□□ 0.36
NEK3-202ENST00000550841 THAP7Q9BT49 309 aaPredicted RBP17.27■□□□□ 0.36
NEK3-202ENST00000550841 RBMX2Q9Y388 322 aaKnown RBP17.27■□□□□ 0.36
NEK3-202ENST00000550841 A0A1W2PPI3 338 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 RNASE1P07998 156 aaKnown RBP17.26■□□□□ 0.35
NEK3-202ENST00000550841 REG1BP48304 166 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 RAB13P51153 203 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 RNASE10Q5GAN6 216 aaKnown RBP17.26■□□□□ 0.35
NEK3-202ENST00000550841 VAX1Q5SQQ9 334 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 TMEM17Q86X19 198 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 Q8N402 240 aa17.26■□□□□ 0.35
NEK3-202ENST00000550841 PIFOQ8TCI5 191 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms