RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ZNF385AQ96PM9 386 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 FHL5Q5TD97 284 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 NCOR1O75376 2440 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 ZNF137PP52743 207 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 GALNT14Q96FL9 552 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 SPINT1O43278 529 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 GREM1O60565 184 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 PGLYRP1O75594 196 aaPredicted RBP13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 GZMHP20718 246 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 PLP1P60201 277 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 UNC119Q13432 240 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 C5orf17Q8NAS9 161 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 OR1B1Q8NGR6 318 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 SPSB2Q99619 263 aa13.68□□□□□ -0.22
RBFOX1-212ENST00000550418 RAMP1O60894 148 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 HBZP02008 142 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 OR2M3Q8NG83 312 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 GPHA2Q96T91 129 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 RNF126Q9BV68 326 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 F8VVB4 439 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 F8VWA3 439 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 CA2P00918 260 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 IBA57Q5T440 356 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 CTHRC1Q96CG8 243 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 LHFPL6Q9Y693 200 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 ATP23Q9Y6H3 246 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 TMEM116Q8NCL8 245 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 Q96M66 194 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 ICE1Q9Y2F5 2266 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 UCP3P55916 312 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 COL10A1Q03692 680 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 STXBP6Q8NFX7 210 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 GDF15Q99988 308 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 SEBOXQ9HB31 216 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
RBFOX1-212ENST00000550418 COLCA2A8K830 154 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 POU2F2P09086 479 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 STAG3L2P0CL84 134 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 FGF12P61328 243 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 FAM117AQ9C073 453 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 DNAJC4Q9NNZ3 241 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 LOXL2Q9Y4K0 774 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 HPRT1P00492 218 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 LCN2P80188 198 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 PSMG3Q9BT73 122 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 CXXC4Q9H2H0 198 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 TRGV5A0A0B4J1U4 118 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 SRIP30626 198 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 KIAA1644Q3SXP7 199 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 ZFP30Q9Y2G7 519 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 CYP2G1PQ6ZSU1 146 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 RCC1LQ96I51 464 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 DCAF16Q9NXF7 216 aa13.66□□□□□ -0.22
RBFOX1-212ENST00000550418 A8MWL6 223 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 TSPAN2O60636 221 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 VENTXO95231 258 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 FOLR2P14207 255 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 LYZP61626 148 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 IL11RAQ14626 422 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 FZR1Q9UM11 496 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 RTTNQ86VV8 2226 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 UQCRFS1P47985 274 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 C10orf113Q5VZT2 155 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 SLC25A47Q6Q0C1 308 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 ZNF488Q96MN9 340 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 TRAV38-1A0A0B4J264 116 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 SMIM17P0DL12 118 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 TNFRSF1AP19438 455 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 COMPP49747 757 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 ZADH2Q8N4Q0 377 aa13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-212ENST00000550418 TMEM229AB2RXF0 380 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 SMIM10L1P0DMW3 83 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 GAS1P54826 345 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 GUSBP11Q6P575 273 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 DEFB124Q8NES8 71 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 SMIM10Q96HG1 83 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A10PA6NDY2 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A18PA6NE21 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A16PA6NEW6 464 aa13.64□□□□□ -0.23
RBFOX1-212ENST00000550418 FAM90A20PA6NIJ5 464 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms