RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 RCC1P18754 421 aaPredicted RBP7.94□□□□□ -1.14
VPS29-208ENST00000550267 CALB2P22676 271 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CD40LGP29965 261 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 PPP1CCP36873 323 aaKnown RBP7.94□□□□□ -1.14
VPS29-208ENST00000550267 OR3A3P47888 321 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 SOX2P48431 317 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CD81P60033 236 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 PMS2P11Q13670 270 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 FLOT2Q14254 428 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 AKIRIN2Q53H80 203 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 FAM131AQ6UXB0 335 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 ZNF833PQ6ZTB9 187 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 LINC00596Q86U02 117 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 Q8N402 240 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 LFNGQ8NES3 379 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CYYR1Q96J86 154 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 RDH12Q96NR8 316 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CLCC1Q96S66 551 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CIB1Q99828 191 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 PDCD1LG2Q9BQ51 273 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 RIBC2Q9H4K1 309 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 ISG20L2Q9H9L3 353 aaKnown RBP7.94□□□□□ -1.14
VPS29-208ENST00000550267 ETAA1Q9NY74 926 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 SAA2-SAA4A0A096LPE2 208 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 C13orf42A0A1B0GVH6 325 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 E9PI62 339 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 TPPPO94811 219 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 SAA2P0DJI9 122 aaPredicted RBP7.93□□□□□ -1.14
VPS29-208ENST00000550267 DEFB125Q8N687 156 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 ACBD7Q8N6N7 88 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 OR5AK2Q8NH90 309 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 TMEM106AQ96A25 262 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 MRPS24Q96EL2 167 aaKnown RBP7.93□□□□□ -1.14
VPS29-208ENST00000550267 S100A13Q99584 98 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 NEURL2Q9BR09 285 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 GABARAPL1Q9H0R8 117 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 TAF9BQ9HBM6 251 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
VPS29-208ENST00000550267 RCC2Q9P258 522 aaKnown RBP7.93□□□□□ -1.14
VPS29-208ENST00000550267 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 TMEM212A6NML5 194 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 MCRIP1C9JLW8 97 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 CNIH1O95406 144 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 FADS2O95864 444 aaKnown RBP7.92□□□□□ -1.14
VPS29-208ENST00000550267 TFAP2AP05549 437 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 RPSAP08865 295 aaKnown RBP7.92□□□□□ -1.14
VPS29-208ENST00000550267 CD7P09564 240 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 GTF2F2P13984 249 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 DEFA5Q01523 94 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 SLC22A6Q4U2R8 563 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 DDI2Q5TDH0 399 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 TRAT1Q6PIZ9 186 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 LHFPL3Q86UP9 236 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 GAPTQ8N292 157 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 POC5Q8NA72 575 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 RGP1Q92546 391 aaPredicted RBP7.92□□□□□ -1.14
VPS29-208ENST00000550267 ALG8Q9BVK2 526 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 JAM3Q9BX67 310 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 SIGLEC8Q9NYZ4 499 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 ENOPH1Q9UHY7 261 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 JPT1Q9UK76 154 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
VPS29-208ENST00000550267 HECTD4Q9Y4D8 3996 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 KIAA1109Q2LD37 5005 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 DEDDO75618 318 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 CA2P00918 260 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 TRBV12-3P01733 135 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 ZNF93P35789 620 aaPredicted RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 MECP2P51608 486 aaKnown RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 GNGT1P63211 74 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 DYRK1AQ13627 763 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 ATP6AP1Q15904 470 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 RAB12Q6IQ22 244 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 GLDNQ6ZMI3 551 aaPredicted RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 OR5T1Q8NG75 326 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 ORAI1Q96D31 301 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 GABARAPL3Q9BY60 117 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 IFI27L2Q9H2X8 130 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 SRD5A3Q9H8P0 318 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 SPACA1Q9HBV2 294 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 PAK1IP1Q9NWT1 392 aaPredicted RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 METTL1Q9UBP6 276 aaKnown RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 POMPQ9Y244 141 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 EXOGQ9Y2C4 368 aaKnown RBP7.91□□□□□ -1.14
VPS29-208ENST00000550267 PEX16Q9Y5Y5 336 aa7.91□□□□□ -1.14
VPS29-208ENST00000550267 UBE2QL1A1L167 161 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 ZNF785A8K8V0 405 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 RGS13O14921 159 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 YPEL1O60688 119 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 ZNF780AO75290 641 aaPredicted RBP7.9□□□□□ -1.14
VPS29-208ENST00000550267 MAS1P04201 325 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 CT45A6P0DMU7 189 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 CT45A5P0DMU8 189 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 CT45A7P0DMV0 189 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 ALDH3A2P51648 485 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 GYS2P54840 703 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 HTD2P86397 168 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 PSG5Q15238 335 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 TATDN3Q17R31 274 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms