RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LYPD6Q86Y78 171 aa9.21□□□□□ -0.94
TRAFD1-205ENST00000548277 MINDY2Q8NBR6 621 aa9.21□□□□□ -0.94
TRAFD1-205ENST00000548277 RAB9BQ9NP90 201 aa9.21□□□□□ -0.94
TRAFD1-205ENST00000548277 FKBP14Q9NWM8 211 aa9.21□□□□□ -0.94
TRAFD1-205ENST00000548277 ZNF580Q9UK33 172 aa9.21□□□□□ -0.94
TRAFD1-205ENST00000548277 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 LDLRAD4O15165 306 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 LGALS1P09382 135 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 OR8U9P0C7N5 309 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 MAPK3P27361 379 aaPredicted RBP9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 CX3CL1P78423 397 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 SIGIRRQ6IA17 410 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 UNQ5815/PRO19632Q6UWF5 114 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 FAM131AQ6UXB0 335 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 Q8N1Y9 231 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 NKAIN3Q8N8D7 197 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 THRSPQ92748 146 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 FAM46BQ96A09 425 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 Q96M66 194 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 UQCC2Q9BRT2 126 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 VCXQ9H320 206 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 ZNF355PQ9NSJ1 428 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 GAB2Q9UQC2 676 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 FOXA2Q9Y261 457 aaPredicted RBP9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 STAB2Q8WWQ8 2551 aa9.2□□□□□ -0.94
TRAFD1-205ENST00000548277 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 CA11O75493 328 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 SC5DO75845 299 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 GLAP06280 429 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 CDK1P06493 297 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 GSTP1P09211 210 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 EGR2P11161 476 aaPredicted RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 TPPP2P59282 170 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 RPL39P5Q59GN2 51 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 C6orf141Q5SZD1 244 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 STEAP3Q658P3 488 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 TRAT1Q6PIZ9 186 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 PPP1R27Q86WC6 154 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 ANKRD13BQ86YJ7 626 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 GAPTQ8N292 157 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 MS4A15Q8N5U1 240 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 NPBQ8NG41 125 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 ISOC1Q96CN7 298 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 FLYWCH2Q96CP2 140 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 TMED9Q9BVK6 235 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 MND1Q9BWT6 205 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 NKX1-2Q9UD57 310 aaPredicted RBP9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 NUBP2Q9Y5Y2 271 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 DNAH7Q8WXX0 4024 aa9.19□□□□□ -0.94
TRAFD1-205ENST00000548277 ANKRD34BA5PLL1 514 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 H7C2Y5 167 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 RRHO14718 337 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 YPEL1O60688 119 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 PDCD6O75340 191 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ARSBP15848 533 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 TMEM267Q0VDI3 215 aaPredicted RBP9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 TMEM30BQ3MIR4 351 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ACTBL2Q562R1 376 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 RBM48Q5RL73 367 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 RNLSQ5VYX0 342 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ZNF660Q6AZW8 331 aaPredicted RBP9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 OR10K2Q6IF99 312 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ZNF833PQ6ZTB9 187 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 SGPP2Q8IWX5 399 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 LFNGQ8NES3 379 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 MRPL30Q8TCC3 161 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 GALMQ96C23 342 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 FAAP24Q9BTP7 215 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 ELOVL1Q9BW60 279 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 CST11Q9H112 138 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 SCN3BQ9NY72 215 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 GHRLQ9UBU3 117 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 JPT1Q9UK76 154 aa9.18□□□□□ -0.94
TRAFD1-205ENST00000548277 RGS11O94810 467 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 NDUFA3O95167 84 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 TRGV3P03979 118 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 CT45A6P0DMU7 189 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 CT45A5P0DMU8 189 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 CT45A7P0DMV0 189 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 SRMP19623 302 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 DEFA5Q01523 94 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 SPHARQ15513 63 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 MED22Q15528 200 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 C19orf54Q5BKX5 351 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 GLT8D1Q68CQ7 371 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms