RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 UBE2J1Q9Y385 318 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-227ENST00000548080 LINC00312Q9Y6C7 94 aa14.25□□□□□ -0.13
HDAC7-227ENST00000548080 KBTBD11-OT1A0A1B0GTJ5 212 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 F2RL2O00254 374 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 LUMP51884 338 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-227ENST00000548080 DLX1P56177 255 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 RPL31P62899 125 aaKnown RBP14.24□□□□□ -0.13
HDAC7-227ENST00000548080 DHRS2Q13268 280 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 PPP1R1AQ13522 171 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 C17orf58Q2M2W7 97 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 ABCA11PQ4W5N1 156 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 TCF23Q7RTU1 214 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 LYG2Q86SG7 212 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 SECTM1Q8WVN6 248 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 ZNF486Q96H40 463 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-227ENST00000548080 PCGF1Q9BSM1 259 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 SLC5A7Q9GZV3 580 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 C19orf12Q9NSK7 152 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 TAS2R3Q9NYW6 316 aa14.24□□□□□ -0.13
HDAC7-227ENST00000548080 DSCAML1Q8TD84 2053 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 C9orf170A2RU37 121 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 GPR37O15354 613 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 PPIAL4GP0DN37 164 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 AKAP14Q86UN6 197 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 FAM185AQ8N0U4 392 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 OR10V1Q8NGI7 309 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 C22orf15Q8WYQ4 148 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 LINC00574Q9H8X3 128 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 OR2S2Q9NQN1 319 aa14.23□□□□□ -0.13
HDAC7-227ENST00000548080 HLA-AP01891 365 aaKnown RBP14.22□□□□□ -0.13
HDAC7-227ENST00000548080 FAM157CP0CG43 387 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 VAMP1P23763 118 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 GNRHRP30968 328 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 PPP1CCP36873 323 aaKnown RBP14.22□□□□□ -0.13
HDAC7-227ENST00000548080 GNMTQ14749 295 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 FCN2Q15485 313 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 KLF17Q5JT82 389 aaPredicted RBP14.22□□□□□ -0.13
HDAC7-227ENST00000548080 TMEM200BQ69YZ2 307 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 PRIMA1Q86XR5 153 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 JPT1Q9UK76 154 aa14.22□□□□□ -0.13
HDAC7-227ENST00000548080 TRBV23-1A0A0A0MS06 115 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 GPR31O00270 319 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 YPEL1O60688 119 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 CCNKO75909 580 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 PIGPP57054 158 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 RIPPLY3P57055 190 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 SRSF2Q01130 221 aaKnown RBP14.21□□□□□ -0.13
HDAC7-227ENST00000548080 LTC4SQ16873 150 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 TMEM30BQ3MIR4 351 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 PHLDA2Q53GA4 152 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 SGPP2Q8IWX5 399 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 PDZD9Q8IXQ8 264 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 C12orf45Q8N5I9 185 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-227ENST00000548080 CCDC71LQ8N9Z2 235 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 LY6G5BQ8NDX9 201 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 YPEL2Q96QA6 119 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 PARP12Q9H0J9 701 aaKnown RBP14.21□□□□□ -0.13
HDAC7-227ENST00000548080 GAL3ST2Q9H3Q3 398 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 CCL28Q9NRJ3 127 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 IDI2-AS1Q9NZ38 188 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 GNG12Q9UBI6 72 aa14.21□□□□□ -0.13
HDAC7-227ENST00000548080 RBM7Q9Y580 266 aaKnown RBP14.21□□□□□ -0.13
HDAC7-227ENST00000548080 SOX21Q9Y651 276 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-227ENST00000548080 TRAV40A0A0B4J280 105 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 TEX13DA0A0J9YY54 714 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-227ENST00000548080 TOX4O94842 621 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 SFT2D2O95562 160 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 FSHBP01225 129 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 OR8U9P0C7N5 309 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 MMP9P14780 707 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 LOXL3P58215 753 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 SUPT4H1P63272 117 aaKnown RBP14.2□□□□□ -0.14
HDAC7-227ENST00000548080 ZNF273Q14593 569 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 FAM53AQ6NSI3 398 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-227ENST00000548080 C11orf88Q6PI97 169 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 LDLRAD3Q86YD5 345 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 OR8U1Q8NH10 309 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 PPP1R14BQ96C90 147 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 TBX15Q96SF7 602 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 SIRPDQ9H106 197 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 SIRT7Q9NRC8 400 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 SLC2A9Q9NRM0 540 aa14.2□□□□□ -0.14
HDAC7-227ENST00000548080 CRYM-AS1A6NIL9 109 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 HSD17B6O14756 317 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 RGS11O94810 467 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 DUS4LO95620 317 aaKnown RBP14.19□□□□□ -0.14
HDAC7-227ENST00000548080 LIPFP07098 398 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 SULT1A3P0DMM9 295 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 SULT1A4P0DMN0 295 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 EPHA1P21709 976 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 OMGP23515 440 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 RND3P61587 244 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 MORN2Q502X0 79 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 ZNF818PQ6ZRF7 136 aa14.19□□□□□ -0.14
HDAC7-227ENST00000548080 OR10A7Q8NGE5 316 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms