RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 IL22RA2Q969J5 263 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 OR2V2Q96R30 315 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SETD2Q9BYW2 2564 aaPredicted RBP13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 TAS2R3Q9NYW6 316 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SHISA9B4DS77 424 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 ADAM20O43506 726 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 GPR137BO60478 399 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 PTBP3O95758 552 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 OR4A8P0C604 315 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 VDAC1P21796 283 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 GNMTQ14749 295 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 SMIM21Q3B7S5 101 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 LRRC29Q8WV35 223 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 SMIM3Q9BZL3 60 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 IFNL4K9M1U5 179 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 JTBO76095 146 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 CRYZL1O95825 349 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 FAM157CP0CG43 387 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 AESQ08117 197 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 EIF5AL1Q6IS14 154 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 OR51H1Q8NH63 302 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 ERGIC1Q969X5 290 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 AKR1E2Q96JD6 320 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 MEGF10Q96KG7 1140 aa13.8□□□□□ -0.2
CHMP1A-204ENST00000547687 IGLV2-14P01704 120 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 IGHV1-46P01743 117 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 TFF1P04155 84 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 NKX2-1P43699 371 aaPredicted RBP13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 COL10A1Q03692 680 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 NMSQ5H8A3 153 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 CLEC9AQ6UXN8 241 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 OR1S2Q8NGQ3 325 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 ITLN1Q8WWA0 313 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 NARFLQ9H6Q4 476 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
CHMP1A-204ENST00000547687 OOEPA6NGQ2 149 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 SERPINE2P07093 398 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 WNT2P09544 360 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 OR3A1P47881 315 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 TUSC1Q2TAM9 212 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 MARC2Q969Z3 335 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 GALMQ96C23 342 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 BSCL2Q96G97 398 aaPredicted RBP13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 SCO1O75880 301 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 CD3EP07766 207 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 OR8U9P0C7N5 309 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 PSG2P11465 335 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 OR8U1Q8NH10 309 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 OR1L1Q8NH94 360 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 COQ2Q96H96 371 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 PARP12Q9H0J9 701 aaKnown RBP13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 METRNQ9UJH8 293 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 KCNS2Q9ULS6 477 aa13.78□□□□□ -0.2
CHMP1A-204ENST00000547687 ZANQ9Y493 2812 aa13.77□□□□□ -0.2
CHMP1A-204ENST00000547687 C12orf77C9JDV5 145 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 E7EQL1 145 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 IL2RGP31785 369 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 GABRA2P47869 451 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 CXorf66Q5JRM2 361 aaPredicted RBP13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 KRBOX4Q5JUW0 171 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 MOGAT3Q86VF5 341 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 BOLLQ8N9W6 283 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 OR10Z1Q8NGY1 313 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 NINJ1Q92982 152 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 ABHD14BQ96IU4 210 aa13.77□□□□□ -0.21
CHMP1A-204ENST00000547687 ZNF705EA8MWA4 302 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 CTRB1P17538 263 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 PVALBP20472 110 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 PRDX2P32119 198 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 POLR2GP62487 172 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 TNFAIP6P98066 277 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 CTRB2Q6GPI1 263 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 CD177Q8N6Q3 437 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 IL19Q9UHD0 177 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 HBZP02008 142 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 EGR1P18146 543 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 GLIPR1P48060 266 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 ID3Q02535 119 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 NHLH2Q02577 135 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 ZCCHC24Q8N2G6 241 aaKnown RBP13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 WFDC1Q9HC57 220 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 LPAR3Q9UBY5 353 aa13.76□□□□□ -0.21
CHMP1A-204ENST00000547687 BORCS7-ASMTA0A0B4J1R7 106 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 SRRM5B3KS81 715 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 FBXO24O75426 580 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 GOSR1O95249 250 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 CFHR2P36980 270 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 GATA4P43694 442 aa13.75□□□□□ -0.21
CHMP1A-204ENST00000547687 DEFB113Q30KQ7 82 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms