RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 BRWD1-AS2P59051 145 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-202ENST00000546386 PRAMEF5Q5TYX0 476 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 LINC00596Q86U02 117 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 PDZD9Q8IXQ8 264 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 BOD1Q96IK1 185 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 ARPC5LQ9BPX5 153 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 TRAF4Q9BUZ4 470 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-202ENST00000546386 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 ELOVL5Q9NYP7 299 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC38-202ENST00000546386 DOPEY1Q5JWR5 2465 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 HCFC1P51610 2035 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 S1PR2O95136 353 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 CDS2O95674 445 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 SLC25A4P12235 298 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 CD200P41217 278 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 CYCSP99999 105 aaKnown RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 SLC51BQ86UW2 128 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 SUCNR1Q9BXA5 334 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 RIMS4Q9H426 269 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 CCDC168Q8NDH2 2452 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 OOEPA6NGQ2 149 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 LHBP01229 141 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 IRF2P14316 349 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 COL8A2P25067 703 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 LMO1P25800 156 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 HMGN3Q15651 99 aa9.92□□□□□ -0.82
CCDC38-202ENST00000546386 RBPMSQ93062 196 aaKnown RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 RNASE6Q93091 150 aaKnown RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 NARS2Q96I59 477 aaKnown RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 MS4A7Q9GZW8 240 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-202ENST00000546386 TENM4Q6N022 2769 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 A0A1W2PPR1 153 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 K7N7A8 449 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 TXNL1O43396 289 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 LPAR6P43657 344 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 NKX2-1P43699 371 aaPredicted RBP9.91□□□□□ -0.82
CCDC38-202ENST00000546386 SRSF3P84103 164 aaKnown RBP9.91□□□□□ -0.82
CCDC38-202ENST00000546386 SRSF4Q08170 494 aaKnown RBP9.91□□□□□ -0.82
CCDC38-202ENST00000546386 OR2F1Q13607 317 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF273Q14593 569 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 SMCO1Q147U7 214 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 NDUFA5Q16718 116 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 NCR3LG1Q68D85 454 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 FAM169BQ8N8A8 192 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 DMBX1Q8NFW5 382 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 HRH4Q9H3N8 390 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 C19orf12Q9NSK7 152 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 SDHAF2Q9NX18 166 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 IL19Q9UHD0 177 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 A0A0D9SG52 128 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 C15orf65H3BRN8 121 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 MYOD1P15172 320 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 NUP62P37198 522 aaPredicted RBP9.91□□□□□ -0.82
CCDC38-202ENST00000546386 ECI1P42126 302 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 UCP3P55916 312 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 OR2B8PP59922 312 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 MST1LQ2TV78 715 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 TOR2AQ5JU69 321 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 SPAG16Q8N0X2 631 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 STPG2Q8N412 459 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 GAFA1Q96PS6 74 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 CABLES2Q9BTV7 478 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 IFT22Q9H7X7 185 aa9.91□□□□□ -0.82
CCDC38-202ENST00000546386 H7C1Q1 480 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 ST8SIA3O43173 380 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 FCGR3BO75015 233 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 CD3EP07766 207 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 TNFSF4P23510 183 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 CHRNB4P30926 498 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 MDH2P40926 338 aaKnown RBP9.9□□□□□ -0.82
CCDC38-202ENST00000546386 RPS23P62266 143 aaKnown RBP9.9□□□□□ -0.82
CCDC38-202ENST00000546386 RUNX1Q01196 453 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 DIAPH2-AS1Q14236 149 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 SLC35E4Q6ICL7 350 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 Q6ZS49 121 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 MUC15Q8N387 334 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 BVESQ8NE79 360 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 NDRG3Q9UGV2 375 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 LAMP3Q9UQV4 416 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 NAV3Q8IVL0 2385 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.82
CCDC38-202ENST00000546386 IGSF23A1L1A6 192 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 SPINT2O43291 252 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 LYG1Q8N1E2 194 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 OR1S2Q8NGQ3 325 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 AGMATQ9BSE5 352 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 KCNJ16Q9NPI9 418 aa9.9□□□□□ -0.82
CCDC38-202ENST00000546386 DSCAML1Q8TD84 2053 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms