RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 C9orf106Q8NAJ2 232 aa13.16□□□□□ -0.3
SCAP-215ENST00000545718 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
SCAP-215ENST00000545718 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
SCAP-215ENST00000545718 KLF2Q9Y5W3 355 aaPredicted RBP13.16□□□□□ -0.3
SCAP-215ENST00000545718 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
SCAP-215ENST00000545718 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 RPS10P46783 165 aaKnown RBP13.15□□□□□ -0.3
SCAP-215ENST00000545718 IFT22Q9H7X7 185 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 BTBD17A6NE02 478 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 IQCF6A8MYZ5 107 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 HBZP02008 142 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 NQO2P16083 231 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 SSTR5P35346 364 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 HBG1P69891 147 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 HBG2P69892 147 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 FABP9Q0Z7S8 132 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 ZNF787Q6DD87 383 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 RBMS3Q6XE24 437 aaKnown RBP13.15□□□□□ -0.3
SCAP-215ENST00000545718 SNIP1Q8TAD8 396 aaKnown RBP13.15□□□□□ -0.3
SCAP-215ENST00000545718 UNKLQ9H9P5 680 aaKnown RBP13.15□□□□□ -0.3
SCAP-215ENST00000545718 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
SCAP-215ENST00000545718 ROS1P08922 2347 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 IGHV3-13P01766 116 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 IGHV3-7P01780 117 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 HBE1P02100 147 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 WT1P19544 449 aaPredicted RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 RPL30P62888 115 aaKnown RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 DLK1P80370 383 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 INO80CQ6PI98 192 aaPredicted RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 LSM10Q969L4 123 aaKnown RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 NIPSNAP3BQ9BS92 247 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 DUSP13Q9UII6 198 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 DCHS1Q96JQ0 3298 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 MUC6Q6W4X9 2439 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 OR5H1A6NKK0 313 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 GLIPR1P48060 266 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 HAPLN4Q86UW8 402 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 CLDND2Q8NHS1 167 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 OR4C12Q96R67 309 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 DCTN5Q9BTE1 182 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 TREM2Q9NZC2 230 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 CLN8Q9UBY8 286 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 GCH1P30793 250 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
SCAP-215ENST00000545718 MEOX2P50222 304 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 ZNF525Q8N782 197 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
SCAP-215ENST00000545718 PTBP3O95758 552 aaKnown RBP13.13□□□□□ -0.31
SCAP-215ENST00000545718 CD55P08174 381 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 CECR9P0C854 216 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 FOLR2P14207 255 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 Q6ZR03 302 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 RBMXL1Q96E39 390 aaKnown RBP13.13□□□□□ -0.31
SCAP-215ENST00000545718 EGLN1Q9GZT9 426 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 FAM234AQ9H0X4 552 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
SCAP-215ENST00000545718 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
SCAP-215ENST00000545718 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 S1PR2O95136 353 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 SLC38A11Q08AI6 406 aa13.13□□□□□ -0.31
SCAP-215ENST00000545718 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 RBKSQ9H477 322 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 C17orf98A8MV24 154 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 ST8SIA5O15466 376 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 IFNA4P05014 189 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 SLC25A6P12236 298 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 CEACAM1P13688 526 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 COL10A1Q03692 680 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 RNF212Q495C1 297 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 VHLLQ6RSH7 139 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 ZNF645Q8N7E2 425 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 ZNF610Q8N9Z0 462 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 NANPQ8TBE9 248 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 COQ2Q96H96 371 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 TUBA4BQ9H853 241 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 PSG11Q9UQ72 335 aa13.12□□□□□ -0.31
SCAP-215ENST00000545718 A0A1B0GW64 132 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 TMEM210A6NLX4 147 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 CEBPZOSA8MTT3 80 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 J3QW42 95 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
SCAP-215ENST00000545718 ACAA1P09110 424 aaPredicted RBP13.11□□□□□ -0.31
SCAP-215ENST00000545718 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 PAX6P26367 422 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 Q3ZCU0 254 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 ZDHHC16Q969W1 377 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
SCAP-215ENST00000545718 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
SCAP-215ENST00000545718 AGAP20933 346 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms