RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FAM209AQ5JX71 171 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 SCTP09683 121 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 SFTPCP11686 197 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 POC1AQ8NBT0 407 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 RBKSQ9H477 322 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 A0A1W2PP11 408 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 CELA2AP08217 269 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 H2BFSP57053 126 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 SNAI3Q3KNW1 292 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 IGKV3D-11A0A0A0MRZ8 115 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 CRYBA2P53672 197 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
COL4A6-209ENST00000545689 TMEM187Q14656 261 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 NRN1LQ496H8 165 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF788Q6ZQV5 615 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 CYB561D1Q8N8Q1 229 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
COL4A6-209ENST00000545689 IGHV3OR15-7A0A075B7D8 119 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 A0A087X0M5 115 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 A0A1B0GX30 115 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 MPTX1A8MV57 137 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 PAXXQ9BUH6 204 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 WNT5BQ9H1J7 359 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 DLL3Q9NYJ7 618 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF716A6NP11 495 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 MPV17P39210 176 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 WDFY1Q8IWB7 410 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 TM2D1Q9BX74 207 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 JPT1Q9UK76 154 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 ADAM11O75078 769 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 SMIM8Q96KF7 97 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 RPL29P47914 159 aaKnown RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 COMPP49747 757 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 ATP5IP56385 69 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 CALHM1Q8IU99 346 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 TAF15Q92804 592 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 CDC42EP3Q9UKI2 254 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 TRAV39A0A0B4J263 110 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 DLL1O00548 723 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 NDUFA2O43678 99 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 MELTFP08582 738 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 HIST1H1BP16401 226 aaKnown RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 RPL30P62888 115 aaKnown RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 SFXN3Q9BWM7 321 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 MEF2BQ02080 365 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 PUSL1Q8N0Z8 303 aaKnown RBP10.79□□□□□ -0.68
COL4A6-209ENST00000545689 LRRC75AQ8NAA5 344 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 SRXN1Q9BYN0 137 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 KCNMB2Q9Y691 235 aa10.79□□□□□ -0.68
COL4A6-209ENST00000545689 A0A0G2JK05 382 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 SNURFLB1AK76 121 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 HYPMO75409 117 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 DANCRP0C864 163 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 C11orf42Q8N5U0 333 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 SPSB2Q99619 263 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 Q6ZN92 141 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 OR11H4Q8NGC9 324 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 CDK2AP1O14519 115 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 PTGDSP41222 190 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 Q1RN00 199 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 GON4LQ3T8J9 2241 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 C19orf24Q9BVV8 132 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-209ENST00000545689 RUNX1Q01196 453 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 SDK1Q7Z5N4 2213 aa10.78□□□□□ -0.68
COL4A6-209ENST00000545689 IER3P46695 156 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 TCL1AP56279 114 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 GBGT1Q8N5D6 347 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF383Q8NA42 475 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF71Q9NQZ8 489 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-209ENST00000545689 IDI2-AS1Q9NZ38 188 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 WASHC3Q9Y3C0 194 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 ANKRD36A6QL64 1941 aa10.77□□□□□ -0.68
COL4A6-209ENST00000545689 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF880Q6PDB4 577 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 PSMG3Q9BT73 122 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-209ENST00000545689 EPOPA6NHQ4 379 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 MNX1P50219 401 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-209ENST00000545689 PQLC2Q6ZP29 291 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 SNRNP40Q96DI7 357 aaKnown RBP10.77□□□□□ -0.69
COL4A6-209ENST00000545689 G0S2P27469 103 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 FGFRL1Q8N441 504 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF658BQ4V348 819 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-209ENST00000545689 TMEM116Q8NCL8 245 aa10.77□□□□□ -0.69
COL4A6-209ENST00000545689 A0A1W2PQM1 296 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 RPL27AP46776 148 aaKnown RBP10.76□□□□□ -0.69
COL4A6-209ENST00000545689 HERVK_113P61574 105 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
COL4A6-209ENST00000545689 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 MIOXQ9UGB7 285 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF98A6NK75 572 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 F5H697 171 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 CFDP00746 253 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms