RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 VDAC1P21796 283 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 NDUFA6P56556 154 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ENDOGQ14249 297 aaKnown RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 LIAT1Q6ZQX7 453 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 TBC1D26Q86UD7 250 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 NFAM1Q8NET5 270 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 OR2W1Q9Y3N9 320 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 THADAQ6YHU6 1953 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 IGKV3-7A0A075B6H7 116 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A1W2PPE3 182 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 NTN3O00634 580 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF207O43670 478 aaKnown RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 UMODP07911 640 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 NTF3P20783 257 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 PPP1CCP36873 323 aaKnown RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 NSUN5P2Q63ZY6 315 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 GLDNQ6ZMI3 551 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 SMIM7Q9BQ49 75 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 DOK5Q9P104 306 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 SLC45A2Q9UMX9 530 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 DOCK6Q96HP0 2047 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 UMAD1C9J7I0 102 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 EFEMP2O95967 443 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 LIMS1P48059 325 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM3AP98173 230 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF90Q03938 601 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OXA1LQ15070 435 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ZXDCQ2QGD7 858 aaPredicted RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 GGNBP1Q5YKI7 109 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 SLC16A12Q6ZSM3 486 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 GAPTQ8N292 157 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 NTNG2Q96CW9 530 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 PERPQ96FX8 193 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ABHD14AQ9BUJ0 271 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 CCL28Q9NRJ3 127 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 GAR1Q9NY12 217 aaKnown RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 IGLV3-12A0A075B6K2 115 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 SNRNP200O75643 2136 aaKnown RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ALX3O95076 343 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 C1QCP02747 245 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 THBDP07204 575 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ADRB1P08588 477 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 GLRXP35754 106 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 DCAF12L2Q5VW00 463 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 BTNL8Q6UX41 500 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 SLC25A42Q86VD7 318 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 GCSAMQ8N6F7 178 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 DUSP18Q8NEJ0 188 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OR1L8Q8NGR8 309 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 Q8WTZ3 238 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 SLIRPQ9GZT3 109 aaKnown RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ZFC3H1O60293 1989 aaKnown RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ARID2Q68CP9 1835 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 KIF13BQ9NQT8 1826 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A0G2JMZ2 1700 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 LRRC37A2A6NM11 1700 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 PPIAL4CA0A0B4J2A2 164 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 CDS2O95674 445 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 PPIAL4GP0DN37 164 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 FGF12P61328 243 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 FFAR4Q5NUL3 377 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF705AQ6ZN79 300 aaPredicted RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OR8I2Q8N0Y5 310 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OR10A7Q8NGE5 316 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OR5C1Q8NGR4 320 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 RETNQ9HD89 108 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 Q9N2K0 584 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 TUBGCP6Q96RT7 1819 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 IGLV1-36A0A0B4J1U3 117 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 CXorf65A6NEN9 183 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 PPP5D1E7EU14 171 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 IGF2P01344 180 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 RPS4Y1P22090 263 aaKnown RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 UCP1P25874 307 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 ACSF3Q4G176 576 aaPredicted RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 TCTE3Q8IZS6 198 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 OR1L6Q8NGR2 347 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 KLHDC2Q9Y2U9 406 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 DSPPQ9NZW4 1301 aa5.95□□□□□ -1.46
SRGAP1-206ENST00000543397 LOC105371242A0A075B767 164 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 SYNGR2O43760 224 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 SLC25A5P05141 298 aaKnown RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 Q6ZNX1 250 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 LINC00470Q9BZP3 86 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 AKIP1Q9NQ31 210 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 PARP11Q9NR21 331 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 RABAC1Q9UI14 185 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 ARHGEF17Q96PE2 2063 aaPredicted RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 C9orf170A2RU37 121 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 HAX1O00165 279 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 APELAP0DMC3 54 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 ZP3P21754 424 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 HTR1DP28221 377 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 ROM1Q03395 351 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 RXFP4Q8TDU9 374 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 PGLYRP3Q96LB9 341 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 PRDM14Q9GZV8 571 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 OTOFQ9HC10 1997 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms