RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CLDN16Q9Y5I7 305 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 PHLDA3Q9Y5J5 127 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 TRPM7Q96QT4 1865 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 H7C2G1 150 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 RPS4XP62701 263 aaKnown RBP16.95■□□□□ 0.3
HDAC4-215ENST00000543185 ASB5Q8WWX0 329 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 A0A1B0GW15 77 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 TMEM250H0YL14 139 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 C17orf51A8MQB3 221 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 J3QR06 171 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 HERPUD1Q15011 391 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 KIR2DL4Q99706 377 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 MIXL1Q9H2W2 232 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 DANCRP0C864 163 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 HOXB1P14653 301 aaPredicted RBP16.94■□□□□ 0.3
HDAC4-215ENST00000543185 LYZL2Q7Z4W2 148 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 CDK2AP1O14519 115 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 MPLP40238 635 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 SSPNQ14714 243 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 SPANXA1Q9NS26 97 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 TNRC6AQ8NDV7 1962 aaKnown RBP16.94■□□□□ 0.3
HDAC4-215ENST00000543185 SARGQ9BW04 601 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 GUCA2BQ16661 112 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 OR4A5Q8NH83 315 aa16.94■□□□□ 0.3
HDAC4-215ENST00000543185 A0A1W2PS18 150 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 RPL36A-HNRNPH2H7BZ11 118 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 RECKO95980 971 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-215ENST00000543185 OR10J6PQ8NGY7 276 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 TMUB1Q9BVT8 246 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FBXO17Q96EF6 278 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 TMEM262E9PQX1 116 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 KIAA0040Q15053 153 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 MEF2CQ06413 473 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-215ENST00000543185 ABHD14AQ9BUJ0 271 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM117AQ9C073 453 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 A1L4Q6 167 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A10PA6NDY2 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A18PA6NE21 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A16PA6NEW6 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A20PA6NIJ5 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A8PA6NJQ4 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A7PA6NKC0 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A22PA8MWA6 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A12PA8MX19 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A5PA8MXJ8 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A23PA8MXZ1 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 PRRT4C9JH25 899 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A15PP0C7V4 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A13PP0C7W8 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A14PP0C7W9 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 FAM90A24PP0C7X0 464 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 PCGF1Q9BSM1 259 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 KCNMB2Q9Y691 235 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 PXMP4Q9Y6I8 212 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 WNT9BO14905 357 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 NHLRC3Q5JS37 347 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 BEND2Q8NDZ0 799 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF506Q5JVG8 444 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 THSD4Q6ZMP0 1018 aa16.93■□□□□ 0.3
HDAC4-215ENST00000543185 SRFP11831 508 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 GFRALQ6UXV0 394 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF645Q8N7E2 425 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 RFESDQ8TAC1 157 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-215ENST00000543185 LIPT2A6NK58 231 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 PSMG3Q9BT73 122 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-215ENST00000543185 FOXJ2Q9P0K8 574 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 SPTY2D1-AS1A0A0U1RR47 76 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 OTPQ5XKR4 325 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 ALKBH6Q3KRA9 238 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 TMEM30BQ3MIR4 351 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 HIKESHIQ53FT3 197 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 LYPD8Q6UX82 237 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 ALKBH7Q9BT30 221 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-215ENST00000543185 ZFP64Q9NPA5 681 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 SLC25A17O43808 307 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 CADM4Q8NFZ8 388 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 OR11G2Q8NGC1 345 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 NDUFB4O95168 129 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF660Q6AZW8 331 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-215ENST00000543185 LRRC61Q9BV99 259 aa16.92■□□□□ 0.3
HDAC4-215ENST00000543185 TRGC1P0CF51 173 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF83P51522 516 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 NUP37Q8NFH4 326 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 OR10AC1Q8NH08 325 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 HLA-DQB1P01920 261 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 HBBP68871 147 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 KCNMB1Q16558 191 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF414Q96IQ9 312 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 MRPL32Q9BYC8 188 aaKnown RBP16.91■□□□□ 0.3
HDAC4-215ENST00000543185 NBASA2RRP1 2371 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 NPIPB9F8W1W9 429 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 GFERP55789 205 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 DPRXA6NFQ7 191 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 PSG2P11465 335 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 TMEM177Q53S58 311 aa16.91■□□□□ 0.3
HDAC4-215ENST00000543185 RGP1Q92546 391 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms