RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 LHFPL4Q7Z7J7 247 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 LYSMD2Q8IV50 215 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 GCDHQ92947 438 aaPredicted RBP9.86□□□□□ -0.83
DDX55-210ENST00000543016 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 TOMM40LQ969M1 308 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 ST6GALNAC6Q969X2 333 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 AJUBAQ96IF1 538 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 S1PR3Q99500 378 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 AGMATQ9BSE5 352 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 IFI27L2Q9H2X8 130 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 ZNRD1Q9P1U0 126 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 KLK11Q9UBX7 282 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 ZNF221Q9UK13 617 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 TCF21O43680 179 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 CD74P04233 296 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 HLA-DMAP28067 261 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 LUMP51884 338 aaPredicted RBP9.85□□□□□ -0.83
DDX55-210ENST00000543016 HILS1P60008 231 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 DGCR2P98153 550 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 MEF2DQ14814 521 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 MSMO1Q15800 293 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 LRRC75BQ2VPJ9 315 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 UTF1Q5T230 341 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 C5orf24Q7Z6I8 188 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 TMEM17Q86X19 198 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 Q8N402 240 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 SIGLECL1Q8N7X8 197 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 C22orf15Q8WYQ4 148 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 THAP7Q9BT49 309 aaPredicted RBP9.85□□□□□ -0.83
DDX55-210ENST00000543016 ABCB10Q9NRK6 738 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 EHFQ9NZC4 300 aa9.85□□□□□ -0.83
DDX55-210ENST00000543016 RBM7Q9Y580 266 aaKnown RBP9.85□□□□□ -0.83
DDX55-210ENST00000543016 A0A1W2PPE3 182 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 HSD17B6O14756 317 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 SLC31A2O15432 143 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 IFNA6P05013 189 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 OR8U9P0C7N5 309 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 FCGR2CP31995 323 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 HRH1P35367 487 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 IER3P46695 156 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 GPR12P47775 334 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 BAMBIQ13145 260 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ZNF79Q15937 498 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 RNASE10Q5GAN6 216 aaKnown RBP9.84□□□□□ -0.83
DDX55-210ENST00000543016 LDLRAD2Q5SZI1 272 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 LIAT1Q6ZQX7 453 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ZNF833PQ6ZTB9 187 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 THNSL2Q86YJ6 484 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 TGIF2LXQ8IUE1 241 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ARRDC1Q8N5I2 433 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ZBTB34Q8NCN2 500 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 OR8U1Q8NH10 309 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ZFAND2BQ8WV99 257 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 ZNF48Q96MX3 618 aaPredicted RBP9.84□□□□□ -0.83
DDX55-210ENST00000543016 SRRQ9GZT4 340 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 PITPNC1Q9UKF7 332 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 HILPDAQ9Y5L2 63 aa9.84□□□□□ -0.83
DDX55-210ENST00000543016 JMJD1CQ15652 2540 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 ST8SIA5O15466 376 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 PPYP01298 95 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 PMP2P02689 132 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 AKAIN1P0CW23 69 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 NFYAP23511 347 aaPredicted RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 FAUP35544 74 aaKnown RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 RFX2P48378 723 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 HERV-K104P61576 105 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 TSPAN5P62079 268 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 TAGLNQ01995 201 aaKnown RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 HABP2Q14520 560 aaPredicted RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 ZNF660Q6AZW8 331 aaPredicted RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 FAM53AQ6NSI3 398 aaPredicted RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 STEAP1BQ6NZ63 245 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 ODF3L1Q8IXM7 274 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 C17orf50Q8WW18 174 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 RTN4IP1Q8WWV3 396 aaPredicted RBP9.83□□□□□ -0.84
DDX55-210ENST00000543016 AKR1E2Q96JD6 320 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 SSX3Q99909 188 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 RAB18Q9NP72 206 aa9.83□□□□□ -0.84
DDX55-210ENST00000543016 SAA2-SAA4A0A096LPE2 208 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 IGHV1-3A0A0C4DH29 117 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 A0A1W2PPI3 338 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 ANKRD20A5PA0PJZ0 165 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 DISC1C4P0D8 188 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 TRIM77I1YAP6 450 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 RAB3DO95716 219 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 CD3DP04234 171 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 FCER2P06734 321 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 SAA2P0DJI9 122 aaPredicted RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 CD1BP29016 333 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 CD40LGP29965 261 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 MC5RP33032 325 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 ECI1P42126 302 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 RNASE12Q5GAN4 147 aaKnown RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 ZNF645Q8N7E2 425 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms