RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 DCAF16Q9NXF7 216 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 DSCAMO60469 2012 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 C17orf98A8MV24 154 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 ATXN7O15265 892 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 MED6O75586 246 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 NXPH3O95157 252 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 OR4A8P0C604 315 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 DANCRP0C864 163 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 GZMHP20718 246 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 CAV2P51636 162 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 RBPJQ06330 500 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 TEX36Q5VZQ5 186 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 DUX4L9Q6RFH8 374 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 ZNF808Q8N4W9 903 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 C14orf79Q96F83 325 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 SLC25A31Q9H0C2 315 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 COA4Q9NYJ1 87 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 JPT1Q9UK76 154 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 VAMP2P63027 116 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 BAXQ07812 192 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 C17orf58Q2M2W7 97 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 DMRTC2Q8IXT2 367 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 ZNF561Q8N587 486 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 NINJ1Q92982 152 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 MS4A7Q9GZW8 240 aaPredicted RBP11.76□□□□□ -0.53
LDB3-207ENST00000542786 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
LDB3-207ENST00000542786 CACNA1DQ01668 2161 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 LINC00473A8K010 186 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 DEFB108AA8MXU0 73 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 TXNL1O43396 289 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 YPEL1O60688 119 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 TNFSF4P23510 183 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 DYNLT3P51808 116 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 BLOC1S1P78537 153 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 MORN2Q502X0 79 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 MIDNQ504T8 468 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 UTF1Q5T230 341 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 ZNF66Q6ZN08 573 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 FGFRL1Q8N441 504 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 YPEL2Q96QA6 119 aa11.75□□□□□ -0.53
LDB3-207ENST00000542786 TSNAXQ99598 290 aaKnown RBP11.75□□□□□ -0.53
LDB3-207ENST00000542786 TMEM218A2RU14 115 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 S1PR2O95136 353 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 M6PRP20645 277 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 AKR1C2P52895 323 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CLINT1Q14677 625 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 FAM209AQ5JX71 171 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 DIRC2Q96SL1 478 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CALYQ9NYX4 217 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 RAI1Q7Z5J4 1906 aaPredicted RBP11.74□□□□□ -0.53
LDB3-207ENST00000542786 SYNGR2O43760 224 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CST7O76096 145 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CLDN1O95832 211 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 ADCYAP1P18509 176 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 OMGP23515 440 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CA7P43166 264 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 ID4P47928 161 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 LINC00205P59089 165 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 CATR1Q13166 79 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 Q3ZCU0 254 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 NCMAPQ5T1S8 102 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 Q6ZRG5 221 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 RNASE11Q8TAA1 199 aaKnown RBP11.74□□□□□ -0.53
LDB3-207ENST00000542786 HSD17B10Q99714 261 aaKnown RBP11.74□□□□□ -0.53
LDB3-207ENST00000542786 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 OR6C3Q9NZP0 311 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 RFNGQ9Y644 331 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 WSB1Q9Y6I7 421 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
LDB3-207ENST00000542786 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 POLEQ07864 2286 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 B8ZZF3 427 aa11.73□□□□□ -0.53
LDB3-207ENST00000542786 FAM90A26D6RGX4 464 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms