RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 IER2Q9BTL4 223 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 IL36GQ9NZH8 169 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 NAT8BQ9UHF3 227 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SPINK4O60575 86 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 ACAA1P09110 424 aaPredicted RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TRGC1P0CF51 173 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 COX5BP10606 129 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 CCKARP32238 428 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 B2MP61769 119 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TMEM251Q8N6I4 163 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 OR8G5Q8NG78 346 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TTTY12Q9BZ98 90 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 CUL9Q8IWT3 2517 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 C20orf202A1L168 122 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 GDF9O60383 454 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 WISP1O95388 367 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 GYPAP02724 150 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM3BP58499 235 aaPredicted RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 HABP2Q14520 560 aaPredicted RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 OR5B3Q8NH48 314 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF552Q9H707 407 aaPredicted RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 SH2D2AQ9NP31 389 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 DECR2Q9NUI1 292 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 ABCA1O95477 2261 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TRAV17A0A0B4J275 112 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 C21orf140B9A014 251 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 PDE6DO43924 150 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 MMP7P09237 267 aaPredicted RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 FOSL1P15407 271 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 CRISP2P16562 243 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 ADCYAP1P18509 176 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 RAB4AP20338 218 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 TMPRSS7Q7RTY8 843 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 SGMS2Q8NHU3 365 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 CMTM2Q8TAZ6 248 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 SSMEM1Q8WWF3 244 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 LSM10Q969L4 123 aaKnown RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 ABHD14AQ9BUJ0 271 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 REPIN1Q9BWE0 567 aaKnown RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 PKIBQ9C010 78 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 MSL2Q9HCI7 577 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 CISD1Q9NZ45 108 aaKnown RBP7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 OR1A1Q9P1Q5 309 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 DMRT1Q9Y5R6 373 aa7.03□□□□□ -1.28
PRKAB1-207ENST00000542698 C5orf63A6NC05 138 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 LINC00587B1AMM8 73 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 FAM90A26D6RGX4 464 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CLN5O75503 358 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 SP1P08047 785 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CD1BP29016 333 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 RAB7AP51149 207 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 TPRX1Q8N7U7 411 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 RAB24Q969Q5 203 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM56Q96MV1 263 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 EGLN1Q9GZT9 426 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 RBKSQ9H477 322 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 PARD6AQ9NPB6 346 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM56-RWDD3S4R434 201 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CACNA1HO95180 2353 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 KIAA1324LA8MWY0 1029 aaPredicted RBP7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 HSBP1O75506 76 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 ADH4P08319 380 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 WDR25Q64LD2 544 aaPredicted RBP7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 OR4S2Q8NH73 311 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 ACY3Q96HD9 319 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 RCC1LQ96I51 464 aaKnown RBP7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 PCGF1Q9BSM1 259 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 NGBQ9NPG2 151 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 GLRX2Q9NS18 164 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 FKBP11Q9NYL4 201 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 TREM2Q9NZC2 230 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 PILRBQ9UKJ0 227 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 ALPK3Q96L96 1907 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CEACAM18A8MTB9 384 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 ST8SIA5O15466 376 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 SCGB2A1O75556 95 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 HBZP02008 142 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 OR10J4P0C629 311 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CT45A6P0DMU7 189 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CT45A5P0DMU8 189 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CT45A7P0DMV0 189 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 GNG4P50150 75 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 RANP62826 216 aaKnown RBP7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 ID3Q02535 119 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 TNFRSF9Q07011 255 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 CT45A1Q5HYN5 189 aa7.02□□□□□ -1.29
PRKAB1-207ENST00000542698 PRR27Q6MZM9 219 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms