RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SLC31A2O15432 143 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 S100GP29377 79 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 NKX2-1P43699 371 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 C17orf58Q2M2W7 97 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF788Q6ZQV5 615 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 C1orf229Q6ZS94 237 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 BAP18Q8IXM2 172 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 CA5BP1Q8WTZ4 195 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 NGBQ9NPG2 151 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 SDHAF2Q9NX18 166 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 COQ3Q9NZJ6 369 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 GNG12Q9UBI6 72 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 NSG2Q9Y328 171 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 DOCK11Q5JSL3 2073 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 FAM24AA6NFZ4 105 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 MMP23AO75900 390 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 CD3EP07766 207 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF816Q0VGE8 651 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF561Q8N587 486 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 STOML3Q8TAV4 291 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 CACNA1BQ00975 2339 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 LYNX1G3V0Z9 82 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CD55P08174 381 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CGB3P0DN86 165 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CGB7P0DN87 165 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 LYNX1P0DP58 116 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 IRF2P14316 349 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 UQCRFS1P47985 274 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 Q3ZCU0 254 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 TOLLIPQ9H0E2 274 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CALYQ9NYX4 217 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CISD1Q9NZ45 108 aaKnown RBP14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 TANC2Q9HCD6 1990 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 ADH4P08319 380 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 TNFRSF1AP19438 455 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 GZMHP20718 246 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 MORN2Q502X0 79 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 ODF3L1Q8IXM7 274 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF295-AS1Q8N0V1 137 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 DYNLRB1Q9NP97 96 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 NDRG3Q9UGV2 375 aa14.29□□□□□ -0.12
TMEM50B-210ENST00000542230 CLEC18AA5D8T8 446 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 KIAA1324LA8MWY0 1029 aaPredicted RBP14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 CLDN14O95500 239 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 TPT1P13693 172 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 LPAR6P43657 344 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 HTD2P86397 168 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 ID3Q02535 119 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 AANATQ16613 207 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 CR1LQ2VPA4 569 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 TEX36Q5VZQ5 186 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 LYPD2Q6UXB3 125 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 PDZD9Q8IXQ8 264 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 CLEC18CQ8NCF0 446 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 PPP1R35Q8TAP8 253 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 C14orf79Q96F83 325 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 PLEKHF2Q9H8W4 249 aa14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 BARX1Q9HBU1 254 aaPredicted RBP14.28□□□□□ -0.12
TMEM50B-210ENST00000542230 IGSF23A1L1A6 192 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 TMEM178BH3BS89 294 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 LGALS8O00214 317 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 CHST1O43916 411 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 PITX3O75364 302 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 CAV2P51636 162 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 AKR1C2P52895 323 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 RPL39P5Q59GN2 51 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 TOR2AQ5JU69 321 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 RNASE11Q8TAA1 199 aaKnown RBP14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 IL22RA2Q969J5 263 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF665Q9H7R5 613 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNRD1Q9P1U0 126 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 RFNGQ9Y644 331 aa14.27□□□□□ -0.12
TMEM50B-210ENST00000542230 VPS13CQ709C8 3753 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 TUBAL3A6NHL2 446 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 H3BP45 60 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 I3L521 148 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 FBXO24O75426 580 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 KRASP01116 189 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 APOBEC3AP31941 199 aaPredicted RBP14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 TCTEX1D2Q8WW35 142 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 FAM234AQ9H0X4 552 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 RNF115Q9Y4L5 304 aa14.27□□□□□ -0.13
TMEM50B-210ENST00000542230 S1PR2O95136 353 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 MUC1P15941 1255 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 NDUFB7P17568 137 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 G6PCP35575 357 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 PAX9P55771 341 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 TFF3Q07654 80 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 SLC25A32Q9H2D1 315 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 TMEM106BQ9NUM4 274 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 MFSD2BA6NFX1 497 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 SIGLEC5O15389 551 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 WNT2P09544 360 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 NCR3LG1Q68D85 454 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms