RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 IGSF23A1L1A6 192 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 DANCRP0C864 163 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 MDH2P40926 338 aaKnown RBP12.42□□□□□ -0.42
GCFC2-211ENST00000541687 GALR1P47211 349 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 RND3P61587 244 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 LINC00518Q8N0U6 118 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 TICRRQ7Z2Z1 1910 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 IGKV1-12A0A0C4DH73 117 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 PROB1E7EW31 1015 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 PITX3O75364 302 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 IGKV1D-12P01611 117 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 SLC24A4Q8NFF2 622 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 SSMEM1Q8WWF3 244 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 TMEM204Q9BSN7 226 aa12.42□□□□□ -0.42
GCFC2-211ENST00000541687 PTTG1IPP53801 180 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 BARX1Q9HBU1 254 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 A0A1B0GU03 582 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 TPPP2P59282 170 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 MYPOPQ86VE0 399 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 KLHDC1Q8N7A1 406 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 LRFN3Q9BTN0 628 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 C21orf140B9A014 251 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 NKX2-8O15522 239 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 PTBP3O95758 552 aaKnown RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 HLA-GP17693 338 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 FAM89BQ8N5H3 189 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 KIAA1456Q9P272 454 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 PLCE1Q9P212 2302 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 NKX6-3A6NJ46 265 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 LRRC30A6NM36 301 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 BMPR1BO00238 502 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 FCN1O00602 326 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-211ENST00000541687 BSXQ3C1V8 233 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 ETFRF1Q6IPR1 90 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 GTF2H5Q6ZYL4 71 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 CORO2AQ92828 525 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
GCFC2-211ENST00000541687 PAGE4O60829 102 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 CAMPP49913 170 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 PAX5Q02548 391 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 FAM78BQ5VT40 261 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 ZNF343Q6P1L6 599 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
GCFC2-211ENST00000541687 OR4C5Q8NGB2 326 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 AMTP48728 403 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 GAMTQ14353 236 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 HIST1H2BAQ96A08 127 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 R3HDM4Q96D70 268 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 PRDM14Q9GZV8 571 aa12.4□□□□□ -0.42
GCFC2-211ENST00000541687 PNRC2Q9NPJ4 139 aaKnown RBP12.4□□□□□ -0.42
GCFC2-211ENST00000541687 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
GCFC2-211ENST00000541687 IGKV1-27A0A075B6S5 117 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 PINLYPA6NC86 204 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 H0Y980 276 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 CYC1P08574 325 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 QRFPP83859 136 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 CSRP2Q16527 193 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 CYYR1Q96J86 154 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.43
GCFC2-211ENST00000541687 SRSF10O75494 262 aaKnown RBP12.39□□□□□ -0.43
GCFC2-211ENST00000541687 TCL1AP56279 114 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 IGKV1D-13A0A0B4J2D9 117 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 IGKV1-13P0DP09 117 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 CCL1P22362 96 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 FGFRL1Q8N441 504 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 TRGV10A0A0A0MS01 117 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 CA11O75493 328 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 CSN1S1P47710 185 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 MEGF10Q96KG7 1140 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 MYO7BQ6PIF6 2116 aa12.39□□□□□ -0.43
GCFC2-211ENST00000541687 TCAPO15273 167 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 KLK10O43240 276 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 TRGC2P03986 189 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 UCP2P55851 309 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 OR4C12Q96R67 309 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 SHANK1Q9Y566 2161 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 WNT9BO14905 357 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 RRP8O43159 456 aaKnown RBP12.38□□□□□ -0.43
GCFC2-211ENST00000541687 OR2J3O76001 311 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 IL3RAP26951 378 aa12.38□□□□□ -0.43
GCFC2-211ENST00000541687 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
GCFC2-211ENST00000541687 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms