RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 UBE2QL1A1L167 161 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 OR11H12B2RN74 326 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
COPA-205ENST00000541366 CALB2P22676 271 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 CD40LGP29965 261 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 ZNF93P35789 620 aaPredicted RBP8.88□□□□□ -0.99
COPA-205ENST00000541366 GTF2A1P52655 376 aaPredicted RBP8.88□□□□□ -0.99
COPA-205ENST00000541366 GYS2P54840 703 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 PSG5Q15238 335 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 TMEM30BQ3MIR4 351 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 DDI2Q5TDH0 399 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 RAB12Q6IQ22 244 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 ZNF562Q6V9R5 426 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 LINC00596Q86U02 117 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 ACBD7Q8N6N7 88 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 ALG8Q9BVK2 526 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 IFI27L2Q9H2X8 130 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 SIGLEC8Q9NYZ4 499 aa8.88□□□□□ -0.99
COPA-205ENST00000541366 METTL1Q9UBP6 276 aaKnown RBP8.88□□□□□ -0.99
COPA-205ENST00000541366 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
COPA-205ENST00000541366 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 TMEM212A6NML5 194 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 H0YJW9 148 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 H7C2Y5 167 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 MAS1P04201 325 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 RPSAP08865 295 aaKnown RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 GSTP1P09211 210 aaKnown RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 LINC00205P59089 165 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 SSBP2P81877 361 aaPredicted RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 AMIGO2Q86SJ2 522 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 LGALS12Q96DT0 336 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 S100A13Q99584 98 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 GABARAPL1Q9H0R8 117 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 RAB9BQ9NP90 201 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 SLC2A8Q9NY64 477 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
COPA-205ENST00000541366 JPT1Q9UK76 154 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 PEX16Q9Y5Y5 336 aa8.87□□□□□ -0.99
COPA-205ENST00000541366 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 YPEL1O60688 119 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 GTF2F2P13984 249 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 PJVKQ0ZLH3 352 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 FXYD3Q14802 87 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 ATP6AP1Q15904 470 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 GUCA2BQ16661 112 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 RPEL1Q2QD12 228 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 XAF1Q6GPH4 301 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 ZNF343Q6P1L6 599 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 TRAT1Q6PIZ9 186 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 OR2AK2Q8NG84 335 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 MRPL30Q8TCC3 161 aaKnown RBP8.86□□□□□ -0.99
COPA-205ENST00000541366 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 YPEL2Q96QA6 119 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 GABARAPL3Q9BY60 117 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 BANF2Q9H503 90 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 MED4Q9NPJ6 270 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 MBNL3Q9NUK0 354 aaKnown RBP8.86□□□□□ -0.99
COPA-205ENST00000541366 POMPQ9Y244 141 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 EXOGQ9Y2C4 368 aaKnown RBP8.86□□□□□ -0.99
COPA-205ENST00000541366 MUC4Q99102 2169 aa8.86□□□□□ -0.99
COPA-205ENST00000541366 A0A0G2JLM5 398 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 SC5DO75845 299 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 BAG2O95816 211 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 APELAP0DMC3 54 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 GNGT1P63211 74 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 HTD2P86397 168 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 DMKNQ6E0U4 476 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 SIGIRRQ6IA17 410 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 ZDHHC13Q8IUH4 622 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 DRAXINQ8NBI3 349 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 BVESQ8NE79 360 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 OR2K2Q8NGT1 345 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 WDR89Q96FK6 387 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 ZNF184Q99676 751 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 SPACA1Q9HBV2 294 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 TMEM138Q9NPI0 162 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 PAK1IP1Q9NWT1 392 aaPredicted RBP8.85□□□□□ -0.99
COPA-205ENST00000541366 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 WASHC3Q9Y3C0 194 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 DNAH17Q9UFH2 4485 aa8.85□□□□□ -0.99
COPA-205ENST00000541366 OR5H14A6NHG9 310 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 H3BNX3 289 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 H3BUA1 57 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 OR2A4O95047 310 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 IGKV1-16P04430 117 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 BDKRB2P30411 391 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 RIPK1Q13546 671 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 TATDN3Q17R31 274 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 MOGAT2Q3SYC2 334 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 LAX1Q8IWV1 398 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 SYS1Q8N2H4 156 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 OR5AN1Q8NGI8 311 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 OR13C5Q8NGS8 318 aa8.84□□□□□ -0.99
COPA-205ENST00000541366 IL1F10Q8WWZ1 152 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms