RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 Q6ZRM9 215 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 SLC35E3Q7Z769 313 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 RBMXL1Q96E39 390 aaKnown RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 NIPSNAP3BQ9BS92 247 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 KIAA2026Q5HYC2 2103 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 LOC102723971A0A1B0GUV8 181 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 TMEM267Q0VDI3 215 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 ALKBH6Q3KRA9 238 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 ZNF324BQ6AW86 544 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 SSX7Q7RTT5 188 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 SAXO1Q8IYX7 474 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 SLC25A40Q8TBP6 338 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 MRPL30Q8TCC3 161 aaKnown RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 VSIRQ9H7M9 311 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 HOXC12P31275 282 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 RAB2AP61019 212 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 IL24Q13007 206 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 TBR1Q16650 682 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 OR2B11Q5JQS5 317 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 C1orf185Q5T7R7 199 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 GPR146Q96CH1 333 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2AAQ96QV6 131 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 DMRT1Q9Y5R6 373 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 CXorf65A6NEN9 183 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 F2RP25116 425 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 TLE4Q04727 773 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 ZNF726P1Q15940 193 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 KHDC3LQ587J8 217 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 THNSL2Q86YJ6 484 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 IL22RA2Q969J5 263 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 RSG1Q9BU20 258 aa14.46□□□□□ -0.09
SPIDR-227ENST00000541342 TRAV1-1A0A0B4J248 108 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 K7ENP7 123 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 TRGC2P03986 189 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 Q8NA96 180 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF488Q96MN9 340 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 SIRT7Q9NRC8 400 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 MSRB2Q9Y3D2 182 aa14.46□□□□□ -0.1
SPIDR-227ENST00000541342 CYB5BO43169 146 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 IGLV2-14P01704 120 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 SOD3P08294 240 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 OR8G1Q15617 311 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 DPPA3Q6W0C5 159 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 KIR2DS1A0A191URI9 304 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 IGKV1-39P01597 117 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 IGKV1D-39P04432 117 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 KIR2DS4P43632 304 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 KIR2DS1Q14954 304 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 FAM180AQ6UWF9 173 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 BHLHA15Q7RTS1 189 aaPredicted RBP14.45□□□□□ -0.1
SPIDR-227ENST00000541342 WDR86Q86TI4 376 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 RPRMQ9NS64 109 aa14.45□□□□□ -0.1
SPIDR-227ENST00000541342 CECR9P0C854 216 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 PSG2P11465 335 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 MPV17P39210 176 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 GNG3P63215 75 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 ARL16Q0P5N6 197 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 PSG7Q13046 419 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 P2RY6Q15077 328 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 MPV17LQ2QL34 196 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 KRTCAP3Q53RY4 240 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF474Q6S9Z5 364 aaPredicted RBP14.44□□□□□ -0.1
SPIDR-227ENST00000541342 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 GNG13Q9P2W3 67 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 OR5B21A6NL26 309 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 HLA-DRB3P79483 266 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 C9orf152Q5JTZ5 239 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 MKXQ8IYA7 352 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 OR51H1Q8NH63 302 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 FAM57AQ8TBR7 257 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 ABHD5Q8WTS1 349 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 OR51I2Q9H344 312 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF665Q9H7R5 613 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 GAR1Q9NY12 217 aaKnown RBP14.44□□□□□ -0.1
SPIDR-227ENST00000541342 DIDO1Q9BTC0 2240 aaKnown RBP14.44□□□□□ -0.1
SPIDR-227ENST00000541342 TRAV24A0A0B4J272 114 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 WRBO00258 174 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 PHOX2AO14813 284 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 IGLV1-44P01699 117 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 BEND4Q6ZU67 534 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 HAPLN4Q86UW8 402 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 C17orf78Q8N4C9 275 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 NEK7Q8TDX7 302 aa14.44□□□□□ -0.1
SPIDR-227ENST00000541342 TRAPPC2LH3BP13 241 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 RHBDL1O75783 438 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 TDGF1P3P51864 188 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 NBEAQ8NFP9 2946 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF729A6NN14 1252 aaPredicted RBP14.43□□□□□ -0.1
SPIDR-227ENST00000541342 HBE1P02100 147 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 RAC2P15153 192 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 TIMP3P35625 211 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 CD200P41217 278 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 STX12Q86Y82 276 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF573Q86YE8 665 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 HIST3H2BBQ8N257 126 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 KLF14Q8TD94 323 aaPredicted RBP14.43□□□□□ -0.1
SPIDR-227ENST00000541342 OR2W1Q9Y3N9 320 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 IGHV1-18A0A0C4DH31 117 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 OR5H1A6NKK0 313 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 PLA2G5P39877 138 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms