RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 FXYD6-FXYD2A0A087WZ82 144 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 KANTRA0A1W2PQU2 76 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 DPRXA6NFQ7 191 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ZSCAN5BA6NJL1 495 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 C17orf100A8MU93 164 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 H0Y980 276 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 H0YL77 283 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 TAAR5O14804 337 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 BET1O15155 118 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 SPRY3O43610 288 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 CDS2O95674 445 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 LHBP01229 141 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 SERPINE2P07093 398 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 HKR1P10072 659 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 PVALBP20472 110 aaPredicted RBP6.94□□□□□ -1.3
CHD4-208ENST00000540960 AADACP22760 399 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 S100A1P23297 94 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 S100A11P31949 105 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 NKX2-5P52952 324 aaPredicted RBP6.94□□□□□ -1.3
CHD4-208ENST00000540960 H2BFSP57053 126 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 FXYD4P59646 89 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 SNRPD2P62316 118 aaKnown RBP6.94□□□□□ -1.3
CHD4-208ENST00000540960 BSPH1Q075Z2 132 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 CATR1Q13166 79 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 SLC9A3R2Q15599 337 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 KRBOX4Q5JUW0 171 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ACOT7LQ6ZUV0 252 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ZNF695Q8IW36 515 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 GCSAMQ8N6F7 178 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 BVESQ8NE79 360 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 OR10A7Q8NGE5 316 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 OR10V1Q8NGI7 309 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 CD300LFQ8TDQ1 290 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 MAFIPQ8WZ33 124 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 SDSLQ96GA7 329 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ZNF488Q96MN9 340 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 MRPL37Q9BZE1 423 aaKnown RBP6.94□□□□□ -1.3
CHD4-208ENST00000540960 MFFQ9GZY8 342 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 FXYD6Q9H0Q3 95 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 ZNF665Q9H7R5 613 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 PLEKHA2Q9HB19 425 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 TAF9BQ9HBM6 251 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 UFSP2Q9NUQ7 469 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 PPP1R3CQ9UQK1 317 aa6.94□□□□□ -1.3
CHD4-208ENST00000540960 IGKV1D-8A0A087WSZ0 117 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 TRGV10A0A0A0MS01 117 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.93□□□□□ -1.3
CHD4-208ENST00000540960 K7N7A8 449 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 LGALS8O00214 317 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 HSPB6O14558 160 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 SCAF4O95104 1147 aaKnown RBP6.93□□□□□ -1.3
CHD4-208ENST00000540960 IGHV1-46P01743 117 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 SCTP09683 121 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 SLC25A6P12236 298 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 GABRA2P47869 451 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 RAB7AP51149 207 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 COL10A1Q03692 680 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 MEF2CQ06413 473 aaPredicted RBP6.93□□□□□ -1.3
CHD4-208ENST00000540960 OPCMLQ14982 345 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 ADIPOQQ15848 244 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 LY6G6FQ5SQ64 297 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 PRAMEF6Q5VXH4 476 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 BRICD5Q6PL45 260 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 MOGAT3Q86VF5 341 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 LDLRAD3Q86YD5 345 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 OR8H1Q8NGG4 311 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 LRRC20Q8TCA0 184 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 PPP1R1CQ8WVI7 109 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 ITLN1Q8WWA0 313 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 TMEM230Q96A57 120 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 PHYHIPLQ96FC7 376 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 TMEM56Q96MV1 263 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 TMEM222Q9H0R3 208 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 UBQLN2Q9UHD9 624 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 JPT1Q9UK76 154 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 FZR1Q9UM11 496 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 PLCE1Q9P212 2302 aa6.93□□□□□ -1.3
CHD4-208ENST00000540960 A0A1W2PPH5 198 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 hADV38S2A0JD32 116 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 ODAMA1E959 279 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 ARPC5O15511 151 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 MPC2O95563 127 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 PSG2P11465 335 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 MMP9P14780 707 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 RPS2P15880 293 aaKnown RBP6.92□□□□□ -1.3
CHD4-208ENST00000540960 VDAC1P21796 283 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 CEACAM6P40199 344 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 OR3A1P47881 315 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 ARHGDIBP52566 201 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 P2RX3P56373 397 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 UBA52P62987 128 aaKnown RBP6.92□□□□□ -1.3
CHD4-208ENST00000540960 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
CHD4-208ENST00000540960 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
CHD4-208ENST00000540960 BAMBIQ13145 260 aa6.92□□□□□ -1.3
CHD4-208ENST00000540960 TMEM187Q14656 261 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms