RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PPP3R1P63098 170 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 GALEQ14376 348 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 LTC4SQ16873 150 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 PIGYQ3MUY2 71 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 PYDC2Q56P42 97 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 FAM27D1Q5T7N8 215 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 DDI2Q5TDH0 399 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 OR2G6Q5TZ20 316 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 ZFAND6Q6FIF0 208 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 SLC25A48Q6ZT89 311 aaKnown RBP5.64□□□□□ -1.51
YBX3-209ENST00000540747 FAM220AQ7Z4H9 259 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 KCTD20Q7Z5Y7 419 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 Q8N1Y9 231 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 OR52N1Q8NH53 320 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 CHAC2Q8WUX2 184 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
YBX3-209ENST00000540747 SLC25A46Q96AG3 418 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 PELI1Q96FA3 418 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 DPCDQ9BVM2 203 aaPredicted RBP5.64□□□□□ -1.51
YBX3-209ENST00000540747 BARHL1Q9BZE3 327 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 NEK6Q9HC98 313 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 VSIG4Q9Y279 399 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 TNCP24821 2201 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 IGHV7-81A0A0B4J1V7 117 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 LINC00854A0A1B0GVQ3 168 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 DAPL1A0PJW8 107 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 G3V318 75 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 OVOL1O14753 267 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 TXNL1O43396 289 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ORC5O43913 435 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 SOX15O60248 233 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 HLA-DRB1P01911 266 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 LIMS3P0CW19 117 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 LIMS4P0CW20 117 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 GZMHP20718 246 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 PTBP1P26599 531 aaKnown RBP eCLIP5.63□□□□□ -1.51
YBX3-209ENST00000540747 FGF9P31371 208 aaPredicted RBP5.63□□□□□ -1.51
YBX3-209ENST00000540747 ZNF134P52741 427 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ALKBH1Q13686 389 aaKnown RBP5.63□□□□□ -1.51
YBX3-209ENST00000540747 TRAM1Q15629 374 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 TRIQKQ629K1 86 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 MZT2BQ6NZ67 158 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ACSM6Q6P461 480 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ADAMTSL5Q6ZMM2 481 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ZNF497Q6ZNH5 498 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 GAPTQ8N292 157 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ACBD7Q8N6N7 88 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 SUMF2Q8NBJ7 301 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 OR13C3Q8NGS6 347 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 RASL11BQ9BPW5 248 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 TOLLIPQ9H0E2 274 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 BABAM2Q9NXR7 383 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 IL36GQ9NZH8 169 aa5.63□□□□□ -1.51
YBX3-209ENST00000540747 ZNF107Q9UII5 783 aaPredicted RBP5.63□□□□□ -1.51
YBX3-209ENST00000540747 KMT2AQ03164 3969 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 HECTD4Q9Y4D8 3996 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 TMEM30CPA0ZSE6 113 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 HMX3A6NHT5 357 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 FAM25AB3EWG3 89 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 FAM25CB3EWG5 89 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 FAM25GB3EWG6 89 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 C12orf77C9JDV5 145 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 LDLRAD4O15165 306 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 ATP6V0E1O15342 81 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 LANCL1O43813 399 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 SAP30O75446 220 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 MT-ND4P03905 459 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 IGHV4-30-4P0DP06 118 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 IL7P13232 177 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 CELP19835 753 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 GALP22466 123 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 RAB9AP51151 201 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 SLURP1P55000 103 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 RBM11P57052 281 aaKnown RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 NDPQ00604 133 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 FABP5Q01469 135 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 CD300CQ08708 224 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 ASAH1Q13510 395 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 CT45A1Q5HYN5 189 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 LYPD6Q86Y78 171 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 SERPINA12Q8IW75 414 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 LAX1Q8IWV1 398 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 ZFP41Q8N8Y5 198 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 OR51A2Q8NGJ7 313 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 OR5D14Q8NGL3 314 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 OR10K1Q8NGX5 313 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 CT45A3Q8NHU0 189 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 UBALD1Q8TB05 177 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 TNFAIP8L1Q8WVP5 186 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 ACOT12Q8WYK0 555 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 RGP1Q92546 391 aaPredicted RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 ARL11Q969Q4 196 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 MRPL48Q96GC5 212 aaKnown RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 RITA1Q96K30 269 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 OR5B12Q96R08 314 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 SDHCQ99643 169 aaPredicted RBP5.62□□□□□ -1.51
YBX3-209ENST00000540747 TMED9Q9BVK6 235 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 JAM3Q9BX67 310 aa5.62□□□□□ -1.51
YBX3-209ENST00000540747 SRRQ9GZT4 340 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms