RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 GAPDHP04406 335 aaKnown RBP12.53□□□□□ -0.4
CACNB1-206ENST00000539338 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
CACNB1-206ENST00000539338 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
CACNB1-206ENST00000539338 HEXA-AS1Q9H8Q6 139 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 TUBD1Q9UJT1 453 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 J3QR06 171 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 F2RL2O00254 374 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 HBZP02008 142 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 OR4A8P0C604 315 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 CCKARP32238 428 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 WNT5AP41221 380 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 IER3P46695 156 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.4
CACNB1-206ENST00000539338 UCP2P55851 309 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 UBE2V2Q15819 145 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 LRP11Q86VZ4 500 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 TNFRSF19Q9NS68 423 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 CBY3A6NI87 242 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 SEMA7AO75326 666 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 BCL2P10415 239 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF273Q14593 569 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 PIPOXQ9P0Z9 390 aa12.52□□□□□ -0.4
CACNB1-206ENST00000539338 A0A1W2PR77 199 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 H0Y980 276 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 CXorf1O96002 111 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 C16orf82Q7Z2V1 217 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 A0A1W2PQM1 296 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 IFNL4K9M1U5 179 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 C10orf113Q5VZT2 155 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 H1FOOQ8IZA3 346 aaPredicted RBP12.52□□□□□ -0.41
CACNB1-206ENST00000539338 SRXN1Q9BYN0 137 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 TIAF1O95411 115 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 NAT1P18440 290 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 KLK2P20151 261 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 CCL8P80075 99 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 GABRA6Q16445 453 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 NSUN5P2Q63ZY6 315 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 FOXJ2Q9P0K8 574 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.41
CACNB1-206ENST00000539338 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 GNG7O60262 68 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 CD1BP29016 333 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-206ENST00000539338 ASCL3Q9NQ33 180 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 PTBP3O95758 552 aaKnown RBP12.51□□□□□ -0.41
CACNB1-206ENST00000539338 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-206ENST00000539338 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
CACNB1-206ENST00000539338 IGLV3-19P01714 112 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 HIST3H3Q16695 136 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 LRRC75AQ8NAA5 344 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
CACNB1-206ENST00000539338 P01737 135 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 SOSTQ9BQB4 213 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 ZDBF2Q9HCK1 2354 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 F5H697 171 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 PGLYRP1O75594 196 aaPredicted RBP12.5□□□□□ -0.41
CACNB1-206ENST00000539338 PGA5P0DJD9 388 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 CCL13Q99616 98 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 ZNF98A6NK75 572 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 DHRS7CA6NNS2 312 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 COL8A1P27658 744 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 RPL31P62899 125 aaKnown RBP12.5□□□□□ -0.41
CACNB1-206ENST00000539338 Q6ZN92 141 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 FAM214BQ7L5A3 538 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 PLXNA1Q9UIW2 1896 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 TGFBR3LH3BV60 316 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 COX6A1P12074 109 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 NHLRC3Q5JS37 347 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 LDLRAD3Q86YD5 345 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 OR1L1Q8NH94 360 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 RASL11BQ9BPW5 248 aa12.5□□□□□ -0.41
CACNB1-206ENST00000539338 SERF2P84101 59 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 Q96M66 194 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 SLC25A10Q9UBX3 287 aaPredicted RBP12.49□□□□□ -0.41
CACNB1-206ENST00000539338 HPRT1P00492 218 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 NPBWR2P48146 333 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 DSCR9P59020 149 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 GPR146Q96CH1 333 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
CACNB1-206ENST00000539338 A0A0G2JK05 382 aa12.49□□□□□ -0.41
CACNB1-206ENST00000539338 TMEM14DPA8MWL7 114 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms