RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 UNC119Q13432 240 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ECSCRQ19T08 205 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ACSM3Q53FZ2 586 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 RPL39P5Q59GN2 51 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 C1orf100Q5SVJ3 147 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 GLT8D1Q68CQ7 371 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ZNF880Q6PDB4 577 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ZNF429Q86V71 674 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 BPIFB6Q8NFQ5 453 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 IL1F10Q8WWZ1 152 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 PHYHIPQ92561 330 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 DCUN1D4Q92564 292 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 TM2D1Q9BX74 207 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ALX4Q9H161 411 aaPredicted RBP9.69□□□□□ -0.86
VAMP1-206ENST00000538970 KCNK15Q9H427 330 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 PIPOXQ9P0Z9 390 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 STEAP1Q9UHE8 339 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 SLC23A1Q9UHI7 598 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 ERGIC3Q9Y282 383 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 A0A1W2PN81 502 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 OR5H14A6NHG9 310 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 RRHO14718 337 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 OVOL1O14753 267 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 RAB29O14966 203 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 LY86O95711 162 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 CT45A6P0DMU7 189 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 CT45A5P0DMU8 189 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 CT45A7P0DMV0 189 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 CHRNA7P36544 502 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 GABPB1Q06547 395 aaPredicted RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 RCN1Q15293 331 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 RBM48Q5RL73 367 aaKnown RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 ZNF660Q6AZW8 331 aaPredicted RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 MOB1BQ7L9L4 216 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 MS4A15Q8N5U1 240 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
VAMP1-206ENST00000538970 PARP12Q9H0J9 701 aaKnown RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 CHMP1AQ9HD42 196 aaPredicted RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
VAMP1-206ENST00000538970 HUWE1Q7Z6Z7 4374 aaKnown RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 A0A0A6YYD4 124 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 TMEM14DPA8MWL7 114 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 LINC01619G3V211 115 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 H0YJW9 148 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 SLC22A1O15245 554 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 SAP30O75446 220 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 SLURP1P55000 103 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 CX3CL1P78423 397 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 QRFPP83859 136 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 OGFRL1Q5TC84 451 aaPredicted RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 RNLSQ5VYX0 342 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 GLDNQ6ZMI3 551 aaPredicted RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 SETD6Q8TBK2 473 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 CASTOR1Q8WTX7 329 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 MND1Q9BWT6 205 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 LSM2Q9Y333 95 aaKnown RBP9.67□□□□□ -0.86
VAMP1-206ENST00000538970 A3GALT2U3KPV4 340 aa9.67□□□□□ -0.86
VAMP1-206ENST00000538970 DNAH1Q9P2D7 4330 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 IGHV4OR15-8A0A075B7B6 117 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 A0A087WW49 117 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 TRBV6-6A0A0A6YYG2 114 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 C3orf84H3BNL1 204 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 FCN1O00602 326 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 ITGB1BP1O14713 200 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 RBBP9O75884 186 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 CDK1P06493 297 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 CD37P11049 281 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
VAMP1-206ENST00000538970 MC5RP33032 325 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 HLA-DRB3P79483 266 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 PLGLAQ15195 96 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 HSD17B12Q53GQ0 312 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 CD200R1LQ6Q8B3 271 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 OR6M1Q8NGM8 313 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 ABHD14BQ96IU4 210 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 HDHD3Q9BSH5 251 aaPredicted RBP9.66□□□□□ -0.86
VAMP1-206ENST00000538970 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 OR1A1Q9P1Q5 309 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 AK3Q9UIJ7 227 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 GAB2Q9UQC2 676 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 WASHC3Q9Y3C0 194 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
VAMP1-206ENST00000538970 H7C2Y5 167 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 CASQ2O14958 399 aaPredicted RBP9.65□□□□□ -0.86
VAMP1-206ENST00000538970 BPNT1O95861 308 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 GSTP1P09211 210 aaKnown RBP9.65□□□□□ -0.86
VAMP1-206ENST00000538970 UCHL1P09936 223 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 SPNP16150 400 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 SRMP19623 302 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms