RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DUXBA0A1W2PPF3 345 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 HPRT1P00492 218 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 FAM27E3Q08E93 113 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 ZNF273Q14593 569 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 FADS6Q8N9I5 356 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 KLF14Q8TD94 323 aaPredicted RBP9.66□□□□□ -0.86
LINC00346-201ENST00000538077 WNT2BQ93097 391 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 AMELYQ99218 206 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 LEUTXA8MZ59 168 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 HIST1H1BP16401 226 aaKnown RBP9.66□□□□□ -0.86
LINC00346-201ENST00000538077 SSTR5P35346 364 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 SUCLG1P53597 346 aaKnown RBP9.66□□□□□ -0.86
LINC00346-201ENST00000538077 HERVK_113P61574 105 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 IZUMO4Q1ZYL8 232 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 NCMAPQ5T1S8 102 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 AMMECR1LQ6DCA0 310 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 SSX8Q7RTT4 187 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 WFDC6Q9BQY6 131 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 CALYQ9NYX4 217 aa9.66□□□□□ -0.86
LINC00346-201ENST00000538077 ZNF735P0CB33 412 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 CCKARP32238 428 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 KLF9Q13886 244 aaPredicted RBP9.65□□□□□ -0.86
LINC00346-201ENST00000538077 DCAF12L2Q5VW00 463 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 SEC11CQ9BY50 192 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 HYPMO75409 117 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 LY6DQ14210 128 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 OR11H7Q8NGC8 314 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 POM121Q96HA1 1249 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 MIXL1Q9H2W2 232 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 SIRT4Q9Y6E7 314 aaPredicted RBP9.65□□□□□ -0.86
LINC00346-201ENST00000538077 ZNF207O43670 478 aaKnown RBP9.65□□□□□ -0.86
LINC00346-201ENST00000538077 OR10J1P30954 320 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 WDR73Q6P4I2 378 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 SLC35E3Q7Z769 313 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 FUT9Q9Y231 359 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 PLXNA1Q9UIW2 1896 aa9.65□□□□□ -0.86
LINC00346-201ENST00000538077 P2RY6Q15077 328 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 AWAT1Q58HT5 328 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 FAM27BQ5VT28 67 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 SGK494Q96LW2 274 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 PTP4A3O75365 173 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 KIR2DL2P43627 348 aaPredicted RBP9.65□□□□□ -0.87
LINC00346-201ENST00000538077 SCAND1P57086 179 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.87
LINC00346-201ENST00000538077 PRSS23O95084 383 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 RUNX1Q01196 453 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ZP4Q12836 540 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 C19orf54Q5BKX5 351 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 OIT3Q8WWZ8 545 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ADIPOR1Q96A54 375 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 SNX22Q96L94 193 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 TBX15Q96SF7 602 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 PRSS27Q9BQR3 290 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 TUBA4BQ9H853 241 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 A0A0G2JMM0 328 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 A0A1W2PPB8 328 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 A0A1W2PRS3 328 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 KIR3DP1A8MWS1 328 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 M0R3E3 92 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ZNF324O75467 553 aaPredicted RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 NGFRP08138 427 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 RFPL3SP0C7P2 107 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 MPV17P39210 176 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 IQCJQ1A5X6 159 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 FAM201AQ5SY85 155 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 OR1N2Q8NGR9 330 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 PXMP4Q9Y6I8 212 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 RGS13O14921 159 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ZNF253O75346 499 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 HOXD4P09016 255 aaPredicted RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 HIST3H3Q16695 136 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 Q9N2K0 584 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 MIOXQ9UGB7 285 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ZNFX1Q9P2E3 1918 aaKnown RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 CRISP2P16562 243 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 FGF12P61328 243 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 TMEM183BQ1AE95 376 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 LRRC75BQ2VPJ9 315 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 LINC00299Q6ZSB3 139 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 LTBP1Q14766 1721 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 MGST3O14880 152 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 MMP9P14780 707 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 DLX1P56177 255 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 CD300CQ08708 224 aa9.64□□□□□ -0.87
LINC00346-201ENST00000538077 FAM53AQ6NSI3 398 aaPredicted RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 ELF5Q9UKW6 265 aaPredicted RBP9.64□□□□□ -0.87
LINC00346-201ENST00000538077 VSIG10L2P0DP72 767 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms