RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 OR10X1Q8NGY0 326 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 CT45A3Q8NHU0 189 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 S1PR3Q99500 378 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 SLC6A7Q99884 636 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 OR1A1Q9P1Q5 309 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 DPM3Q9P2X0 92 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 IGHV3-43A0A0B4J1X8 118 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 BUB1B-PAK6H3BSN5 160 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 M0QYG6 137 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 IGHV3-43DP0DP04 118 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 NFYAP23511 347 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-205ENST00000535927 CCDC144NLQ6NUI1 221 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 C9orf139Q6ZV77 190 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 SLC38A6Q8IZM9 456 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 UBALD1Q8TB05 177 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 LHX4Q969G2 390 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 YAE1D1Q9NRH1 226 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 MCUBQ9NWR8 336 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 NUP50Q9UKX7 468 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 DNHD1Q96M86 4753 aa13.22□□□□□ -0.29
VAMP1-205ENST00000535927 NPFFO15130 113 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 PLA2G10O15496 165 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 FSHBP01225 129 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 ARG1P05089 322 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 AADACP22760 399 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF134P52741 427 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 GNMTQ14749 295 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
VAMP1-205ENST00000535927 C11orf88Q6PI97 169 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 IDO2Q6ZQW0 420 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 CMTM1Q8IZ96 169 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF645Q8N7E2 425 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 OR51S1Q8NGJ8 323 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 ADTRPQ96IZ2 230 aa13.21□□□□□ -0.29
VAMP1-205ENST00000535927 GAPDHP04406 335 aaKnown RBP13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 GPR12P47775 334 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 ZNF816Q0VGE8 651 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-205ENST00000535927 AANATQ16613 207 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 SCGB2B2Q4G0G5 96 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 AADACL3Q5VUY0 350 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 CLEC9AQ6UXN8 241 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR8H3Q8N146 312 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 TCTEX1D1Q8N7M0 179 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 ZDHHC22Q8N966 263 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR4D10Q8NGI6 311 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR4P4Q8NGL7 312 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR8U1Q8NH10 309 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 OR56B4Q8NH76 319 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 ZFAND2BQ8WV99 257 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 SLC5A7Q9GZV3 580 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 IFI27L2Q9H2X8 130 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 CDC42EP3Q9UKI2 254 aa13.2□□□□□ -0.3
VAMP1-205ENST00000535927 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-205ENST00000535927 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 PIGBOS1A0A0B4J2F0 54 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 LY6LH3BQJ8 138 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 GPR31O00270 319 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 B3GALNT1O75752 331 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 LY6G6DO95868 133 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 AVPP01185 164 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 COX7A1P24310 79 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 SLC6A1P30531 599 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 ZNF833PQ6ZTB9 187 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 LYG1Q8N1E2 194 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 BVESQ8NE79 360 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 ST6GALNAC6Q969X2 333 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
VAMP1-205ENST00000535927 RSRP1Q9BUV0 290 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 DPAGT1Q9H3H5 408 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-205ENST00000535927 JMJD1CQ15652 2540 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 TLN2Q9Y4G6 2542 aa13.19□□□□□ -0.3
VAMP1-205ENST00000535927 TRAV40A0A0B4J280 105 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 OR5H14A6NHG9 310 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 NDUFB6O95139 128 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 CTSDP07339 412 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-205ENST00000535927 GNG10P50151 68 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
VAMP1-205ENST00000535927 RND3P61587 244 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 IFITM3Q01628 133 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-205ENST00000535927 C5orf24Q7Z6I8 188 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 RPEQ96AT9 228 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-205ENST00000535927 MEGF9Q9H1U4 602 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 OR2D2Q9H210 308 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
VAMP1-205ENST00000535927 C14orf166Q9Y224 244 aaKnown RBP13.18□□□□□ -0.3
VAMP1-205ENST00000535927 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 PTTG1O95997 202 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 RRASP10301 218 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 GNRHRP30968 328 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 MC5RP33032 325 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms