RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SRSF6Q13247 344 aaKnown RBP11.08□□□□□ -0.64
LDLR-203ENST00000535915 ICAM4Q14773 271 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 ADAM5Q6NVV9 412 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 FDCSPQ8NFU4 85 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 RSG1Q9BU20 258 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 RNF150Q9ULK6 438 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.08□□□□□ -0.64
LDLR-203ENST00000535915 TMEM30CPA0ZSE6 113 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 RNF212BA8MTL3 300 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 H3BQ15 152 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 MLNRO43193 412 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 WISP2O76076 250 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
LDLR-203ENST00000535915 IGHG3P01860 377 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 OR3A1P47881 315 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 HOXA4Q00056 320 aaPredicted RBP11.08□□□□□ -0.64
LDLR-203ENST00000535915 SSX2Q16385 188 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 OR1L1Q8NH94 360 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 GALMQ96C23 342 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 SVILO95425 2214 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
LDLR-203ENST00000535915 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 CLDND2Q8NHS1 167 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 NBEAQ8NFP9 2946 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 OR2C1O95371 312 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 HSPB1P04792 205 aaKnown RBP11.07□□□□□ -0.64
LDLR-203ENST00000535915 IL2RGP31785 369 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 HBG1P69891 147 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 HBG2P69892 147 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 AESQ08117 197 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 SPANXN5Q5MJ07 72 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 VWA1Q6PCB0 445 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 DMRTC2Q8IXT2 367 aaPredicted RBP11.07□□□□□ -0.64
LDLR-203ENST00000535915 CYB561D1Q8N8Q1 229 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 C14orf144Q96I85 54 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 OR2D2Q9H210 308 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 HES4Q9HCC6 221 aa11.07□□□□□ -0.64
LDLR-203ENST00000535915 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 RPS23P62266 143 aaKnown RBP11.06□□□□□ -0.64
LDLR-203ENST00000535915 ZNF525Q8N782 197 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 ZNF645Q8N7E2 425 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 ZNF383Q8NA42 475 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 FZR1Q9UM11 496 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 CACNA1GO43497 2377 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
LDLR-203ENST00000535915 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 ZNF429Q86V71 674 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 ZNF808Q8N4W9 903 aaPredicted RBP11.06□□□□□ -0.64
LDLR-203ENST00000535915 OR52L2PQ8NGH6 319 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 S100PBPQ96BU1 408 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 SSX3Q99909 188 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 RPRMQ9NS64 109 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 GNG13Q9P2W3 67 aa11.06□□□□□ -0.64
LDLR-203ENST00000535915 OOEPA6NGQ2 149 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 RAMP3O60896 148 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 TFF1P04155 84 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 CD82P27701 267 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 S100A2P29034 98 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 TAGLN2P37802 199 aaKnown RBP11.05□□□□□ -0.64
LDLR-203ENST00000535915 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
LDLR-203ENST00000535915 GABRA2P47869 451 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 UBE2KP61086 200 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 GUSBP1Q15486 140 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 FAM53AQ6NSI3 398 aaPredicted RBP11.05□□□□□ -0.64
LDLR-203ENST00000535915 HAPLN4Q86UW8 402 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 NINJ1Q92982 152 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 CXXC4Q9H2H0 198 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 HIPK2Q9H2X6 1198 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 GFOD1Q9NXC2 390 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 BOD1L1Q8NFC6 3051 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 PPIHO43447 177 aaKnown RBP11.05□□□□□ -0.64
LDLR-203ENST00000535915 HBZP02008 142 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 NDUFB7P17568 137 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 FABP6P51161 128 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 PYY3Q5JQD4 70 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 SLC35E4Q6ICL7 350 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 FAM180AQ6UWF9 173 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 MMP24Q9Y5R2 645 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 SLC31A2O15432 143 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 KRASP01116 189 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 TAS2R60P59551 318 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 ZNF816Q0VGE8 651 aaPredicted RBP11.05□□□□□ -0.64
LDLR-203ENST00000535915 LCN15Q6UWW0 184 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 ACP7Q6ZNF0 438 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 MRGPRDQ8TDS7 321 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 MSL2Q9HCI7 577 aa11.05□□□□□ -0.64
LDLR-203ENST00000535915 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 ZFP92A6NM28 416 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms