RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 VEGFCP49767 419 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 ARHGDIBP52566 201 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 ZNF137PP52743 207 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 Q3ZCU0 254 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 ZNF880Q6PDB4 577 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 THNSL2Q86YJ6 484 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 ODF3L1Q8IXM7 274 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 IZUMO1Q8IYV9 350 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 Q8N6K4 173 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 C5orf56Q8N8D9 126 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 RTN4IP1Q8WWV3 396 aaPredicted RBP13.01□□□□□ -0.33
ATL3-202ENST00000535789 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 TGP01266 2768 aa13.01□□□□□ -0.33
ATL3-202ENST00000535789 SCGNO76038 276 aa13□□□□□ -0.33
ATL3-202ENST00000535789 PPP1CCP36873 323 aaKnown RBP13□□□□□ -0.33
ATL3-202ENST00000535789 TALDO1P37837 337 aa13□□□□□ -0.33
ATL3-202ENST00000535789 TMEM50BP56557 158 aa13□□□□□ -0.33
ATL3-202ENST00000535789 TAS2R20P59543 309 aa13□□□□□ -0.33
ATL3-202ENST00000535789 EBI3Q14213 229 aa13□□□□□ -0.33
ATL3-202ENST00000535789 ZNF79Q15937 498 aa13□□□□□ -0.33
ATL3-202ENST00000535789 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
ATL3-202ENST00000535789 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
ATL3-202ENST00000535789 S100ZQ8WXG8 99 aa13□□□□□ -0.33
ATL3-202ENST00000535789 FABP12A6NFH5 140 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 SPINT2O43291 252 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 TPPPO94811 219 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 TMEM11P17152 192 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 PTBP1P26599 531 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATL3-202ENST00000535789 BLVRBP30043 206 aaPredicted RBP12.99□□□□□ -0.33
ATL3-202ENST00000535789 ZNF45Q02386 682 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 HNF4GQ14541 408 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 MORN2Q502X0 79 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 TMEM69Q5SWH9 247 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 EAF1Q96JC9 268 aaPredicted RBP12.99□□□□□ -0.33
ATL3-202ENST00000535789 PARP12Q9H0J9 701 aaKnown RBP12.99□□□□□ -0.33
ATL3-202ENST00000535789 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 AK3Q9UIJ7 227 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
ATL3-202ENST00000535789 TRAV18A0A075B6X5 111 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 MFNGO00587 321 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 HLA-DQB1P01920 261 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 IL18Q14116 193 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 HES1Q14469 280 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 TMEM30BQ3MIR4 351 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 ZNF260Q3ZCT1 412 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 ARSJQ5FYB0 599 aaPredicted RBP12.98□□□□□ -0.33
ATL3-202ENST00000535789 MOB3BQ86TA1 216 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 ZNF554Q86TJ5 538 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 NEDD4LQ96PU5 975 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 PECRQ9BY49 303 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
ATL3-202ENST00000535789 AUNIPQ9H7T9 357 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 OR2S2Q9NQN1 319 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 JPT1Q9UK76 154 aa12.98□□□□□ -0.33
ATL3-202ENST00000535789 GAPDHP04406 335 aaKnown RBP12.97□□□□□ -0.33
ATL3-202ENST00000535789 HIST1H1DP16402 221 aaKnown RBP12.97□□□□□ -0.33
ATL3-202ENST00000535789 CD83Q01151 205 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 DEFA6Q01524 100 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 ZNF846Q147U1 533 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 PYHIN1Q6K0P9 492 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 C1QL4Q86Z23 238 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 PHF21AQ96BD5 680 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 RAB3CQ96E17 227 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
ATL3-202ENST00000535789 SRRQ9GZT4 340 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATL3-202ENST00000535789 PLSCR3Q9NRY6 295 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
ATL3-202ENST00000535789 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
ATL3-202ENST00000535789 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 LINC01548A6NM66 108 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 FGF16O43320 207 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 PTHLHP12272 177 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 GNB3P16520 340 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 HTD2P86397 168 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 CDNFQ49AH0 187 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 Q8N9W7 124 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 OR5AU1Q8NGC0 362 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.33
ATL3-202ENST00000535789 ABHD14AQ9BUJ0 271 aa12.96□□□□□ -0.33
ATL3-202ENST00000535789 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.33
ATL3-202ENST00000535789 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.33
ATL3-202ENST00000535789 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
ATL3-202ENST00000535789 TMEM235A6NFC5 223 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms