RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 SPINK14Q6IE38 97 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 TUSC5Q8IXB3 177 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 ZNF808Q8N4W9 903 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-214ENST00000535493 OR5R1Q8NH85 324 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 ABHD14BQ96IU4 210 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 TRIOBPQ9H2D6 2365 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 NCOR1O75376 2440 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 A0A0U1RQK1 487 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 NUPR1O60356 82 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 G6PCP35575 357 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
HDAC4-214ENST00000535493 TFF3Q07654 80 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 TEX38Q6PEX7 206 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 TMEM256Q8N2U0 113 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 AGBL5Q8NDL9 886 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 SPSB4Q96A44 273 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 DERL1Q9BUN8 251 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 SH2D2AQ9NP31 389 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 DUXBA0A1W2PPF3 345 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 DVL1O14640 695 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 TOX3O15405 576 aaPredicted RBP11.34□□□□□ -0.59
HDAC4-214ENST00000535493 HBG1P69891 147 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 HBG2P69892 147 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 C3AR1Q16581 482 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 ABLIM2Q6H8Q1 611 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
HDAC4-214ENST00000535493 GPR179Q6PRD1 2367 aa11.34□□□□□ -0.59
HDAC4-214ENST00000535493 GJE1A6NN92 205 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 KBTBD11O94819 623 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 SCGB1D1O95968 90 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 S100GP29377 79 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 CEACAM6P40199 344 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 PAX5Q02548 391 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 Q0VFX4 171 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 DNASE2BQ8WZ79 361 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 NPPCP23582 126 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 CST9LP1Q5W188 147 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 Q6ZS49 121 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 PLPPR2Q96GM1 343 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 HES7Q9BYE0 225 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 PRDM14Q9GZV8 571 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF391Q9UJN7 358 aa11.33□□□□□ -0.6
HDAC4-214ENST00000535493 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
HDAC4-214ENST00000535493 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 DEGS1O15121 323 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 RBMXL2O75526 392 aaKnown RBP11.32□□□□□ -0.6
HDAC4-214ENST00000535493 PSMB3P49720 205 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 BTNL3Q6UXE8 466 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 Q8NFD4 153 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 P2RX4Q99571 388 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 SNHG12Q9BXW3 62 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 OR51I2Q9H344 312 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 IFNA1P01562 189 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 GYPAP02724 150 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 CTXN2P0C2S0 81 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-214ENST00000535493 SRD5A2P31213 254 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 SERF2P84101 59 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
HDAC4-214ENST00000535493 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 ICE1Q9Y2F5 2266 aa11.32□□□□□ -0.6
HDAC4-214ENST00000535493 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 FGF5P12034 268 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 FFAR4Q5NUL3 377 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-214ENST00000535493 HIPK2Q9H2X6 1198 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 TMEM9BQ9NQ34 198 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 ZG16O60844 167 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 PAX1P15863 534 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 TDRG1Q3Y452 100 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 IFI44Q8TCB0 444 aa11.31□□□□□ -0.6
HDAC4-214ENST00000535493 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-214ENST00000535493 TRAV38-1A0A0B4J264 116 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 HRASP01112 189 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 MPLP40238 635 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 268.5 ms