RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PPIAL4GP0DN37 164 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 TGIF1Q15583 401 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 LY6EQ16553 131 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 ST6GAL2Q96JF0 529 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 TBX15Q96SF7 602 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 NANOS3P60323 173 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 BPIFA4PQ86YQ2 179 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 ZNF502Q8TBZ5 544 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 C7orf77A4D0Y5 90 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 H0Y980 276 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 KCNAB3O43448 404 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 LINC00869P0C866 280 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PDLIM4P50479 330 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 SELENOTP62341 195 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 OR52M1Q8NGK5 317 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PILRAQ9UKJ1 303 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PRR19A6NJB7 356 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PACRGQ96M98 296 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PLAURQ03405 335 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 IFITM10A6NMD0 228 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM53AQ6NSI3 398 aaPredicted RBP15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 OR4B1Q8NGF8 309 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 OR4C12Q96R67 309 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 CCL19Q99731 98 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 MYO5AQ9Y4I1 1855 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 MEOX2P50222 304 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 SUCLG1P53597 346 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 IRF3Q14653 427 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 ATG101Q9BSB4 218 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 MFAP4P55083 255 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 C10orf111Q8N326 155 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 ZFP30Q9Y2G7 519 aa15.69■□□□□ 0.1
SFSWAP-203ENST00000535236 STPG2Q8N412 459 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 OR11H7Q8NGC8 314 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 DCTN5Q9BTE1 182 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 MESP2Q0VG99 397 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 IL17BQ9UHF5 180 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 A8MWL6 223 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 ADIPOQQ15848 244 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 SLC25A47Q6Q0C1 308 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 DPH3Q96FX2 82 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 SFXN3Q9BWM7 321 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 CALYQ9NYX4 217 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 HSPB7Q9UBY9 170 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 HS3ST3B1Q9Y662 390 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 LOC105371242A0A075B767 164 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 FSTP19883 344 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 CEBPDP49716 269 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 STRCQ7RTU9 1775 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 SCTP09683 121 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 BTF3P20290 206 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 SERF2P84101 59 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 ATP5G2Q06055 141 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 PRSS27Q9BQR3 290 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 IL36RNQ9UBH0 155 aa15.68■□□□□ 0.1
SFSWAP-203ENST00000535236 ARF6P62330 175 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 H1FOOQ8IZA3 346 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 ADIPOR1Q96A54 375 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 SCN1AP35498 2009 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 IGKV1-8A0A0C4DH67 115 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MPDU1O75352 247 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MMP9P14780 707 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MFAP2P55001 183 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 CDCP2Q5VXM1 449 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 RGP1Q92546 391 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 RSG1Q9BU20 258 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MRPS18AQ9NVS2 196 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 CD1AP06126 327 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 KLRB1Q12918 225 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 DUX5Q96PT3 197 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 ZNF430Q9H8G1 570 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 PLAUP00749 431 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 C8orf82Q6P1X6 216 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MUC15Q8N387 334 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 RAB37Q96AX2 223 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 MOB4Q9Y3A3 225 aa15.67■□□□□ 0.1
SFSWAP-203ENST00000535236 TRPM6Q9BX84 2022 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 SLC25A17O43808 307 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FCGR2BP31994 310 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 HERPUD1Q15011 391 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 RHOVQ96L33 236 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 PKIBQ9C010 78 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 ODAMA1E959 279 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 PF4P02776 101 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 TNFSF18Q9UNG2 199 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 VAX1Q5SQQ9 334 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 ABCA3Q99758 1704 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 TRAV30A0A087WSZ9 112 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A10PA6NDY2 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A18PA6NE21 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A16PA6NEW6 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A20PA6NIJ5 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A8PA6NJQ4 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A7PA6NKC0 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A22PA8MWA6 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A12PA8MX19 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A5PA8MXJ8 464 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms