RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TMEM9BQ9NQ34 198 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 FRYQ5TBA9 3013 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 MDFIC2A0A1B0GVS7 189 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 OR3A1P47881 315 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF573Q86YE8 665 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-232ENST00000535094 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 ZDHHC11Q9H8X9 412 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
MCF2L-232ENST00000535094 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 IGKV1-6A0A0C4DH72 117 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 PATE3B3GLJ2 98 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 Q6ZPA2 131 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 FGFRL1Q8N441 504 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-232ENST00000535094 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 C1QTNF9BB2RNN3 333 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 TGOLN2O43493 480 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 MPLP40238 635 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 PAX9P55771 341 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 UCP2P55851 309 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF525Q8N782 197 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 GTF3AQ92664 365 aaKnown RBP13.54□□□□□ -0.24
MCF2L-232ENST00000535094 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 GNG3P63215 75 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 RAB24Q969Q5 203 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 PAM16Q9Y3D7 125 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 KITLGP21583 273 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 SRD5A2P31213 254 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 WNT5AP41221 380 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 DLL3Q9NYJ7 618 aa13.54□□□□□ -0.24
MCF2L-232ENST00000535094 PKDREJQ9NTG1 2253 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 IGHV1-45A0A0A0MS14 117 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 NDUFB4O95168 129 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 TAS2R60P59551 318 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 IQCJQ1A5X6 159 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ZDHHC16Q969W1 377 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 RYDENQ9NUL5 291 aaKnown RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF391Q9UJN7 358 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 LILRA1O75019 489 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 TFF1P04155 84 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 GZMBP10144 247 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 PPP1CBP62140 327 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF90Q03938 601 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 PRSS8Q16651 343 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 NEIL1Q96FI4 390 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 SF3B5Q9BWJ5 86 aaKnown RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 HES7Q9BYE0 225 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 SRD5A3Q9H8P0 318 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 SERTAD4Q9NUC0 356 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 FZR1Q9UM11 496 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ST8SIA5O15466 376 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 EPHA8P29322 1005 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 RPL23P62829 140 aaKnown RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF124Q15973 351 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 RPP25LQ8N5L8 163 aaKnown RBP13.53□□□□□ -0.24
MCF2L-232ENST00000535094 CTDSP1Q9GZU7 261 aa13.53□□□□□ -0.24
MCF2L-232ENST00000535094 GALR2O43603 387 aaPredicted RBP13.52□□□□□ -0.24
MCF2L-232ENST00000535094 OR4A8P0C604 315 aa13.52□□□□□ -0.24
MCF2L-232ENST00000535094 CEACAM21Q3KPI0 293 aa13.52□□□□□ -0.24
MCF2L-232ENST00000535094 FAM53AQ6NSI3 398 aaPredicted RBP13.52□□□□□ -0.24
MCF2L-232ENST00000535094 MRGPRDQ8TDS7 321 aa13.52□□□□□ -0.24
MCF2L-232ENST00000535094 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.24
MCF2L-232ENST00000535094 CDH20Q9HBT6 801 aa13.52□□□□□ -0.24
MCF2L-232ENST00000535094 ZG16O60844 167 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 CELA3AP09093 270 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 LINC00205P59089 165 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 HIST1H3AP68431 136 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 TFF3Q07654 80 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 SGMS2Q8NHU3 365 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 HEATR1Q9H583 2144 aaKnown RBP13.52□□□□□ -0.25
MCF2L-232ENST00000535094 IGLV3-32A0A0A0MS00 114 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 IGLV3-1P01715 115 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 COX6A1P12074 109 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 HOXA4Q00056 320 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-232ENST00000535094 TCF23Q7RTU1 214 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 TBX15Q96SF7 602 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 RIMS4Q9H426 269 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-232ENST00000535094 PLSCR2Q9NRY7 297 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 B4GALT7Q9UBV7 327 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 BOKQ9UMX3 212 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-232ENST00000535094 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
MCF2L-232ENST00000535094 A0A1B0GW64 132 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 LRP5LA4QPB2 252 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-232ENST00000535094 SLC35B1P78383 322 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 SERF2P84101 59 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 PARD6AQ9NPB6 346 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 GNG12Q9UBI6 72 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-232ENST00000535094 KBTBD11O94819 623 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 HRASP01112 189 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 KRTDAPP60985 99 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 ARG2P78540 354 aa13.51□□□□□ -0.25
MCF2L-232ENST00000535094 CATR1Q13166 79 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms