RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 JAM3Q9BX67 310 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 TAF9BQ9HBM6 251 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 SPACA1Q9HBV2 294 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 ZC4H2Q9NQZ6 224 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 MBNL3Q9NUK0 354 aaKnown RBP5.85□□□□□ -1.47
NXF1-215ENST00000533440 ARGLU1Q9NWB6 273 aaPredicted RBP5.85□□□□□ -1.47
NXF1-215ENST00000533440 PEMTQ9UBM1 199 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 ING4Q9UNL4 249 aa5.85□□□□□ -1.47
NXF1-215ENST00000533440 A0A1W2PP11 408 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 DAPL1A0PJW8 107 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 OR5H14A6NHG9 310 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 MCRIP1C9JLW8 97 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 H0YJW9 148 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 J3QLW9 94 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 SLC22A1O15245 554 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 ZNF780AO75290 641 aaPredicted RBP5.84□□□□□ -1.47
NXF1-215ENST00000533440 CA11O75493 328 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 SC5DO75845 299 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 ZNF19P17023 458 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 SERPINA2P20848 420 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 MC5RP33032 325 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 SSBP2P81877 361 aaPredicted RBP5.84□□□□□ -1.47
NXF1-215ENST00000533440 PSG5Q15238 335 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 DEFB114Q30KQ6 69 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 C5orf24Q7Z6I8 188 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 LYG2Q86SG7 212 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 ZNF554Q86TJ5 538 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 OR5T1Q8NG75 326 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 OR8J1Q8NGP2 316 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 GHSRQ92847 366 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 RFKQ969G6 155 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 C4orf36Q96KX1 117 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 CLCC1Q96S66 551 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 GGTLC1Q9BX51 225 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 TINAGL1Q9GZM7 467 aaPredicted RBP5.84□□□□□ -1.47
NXF1-215ENST00000533440 IFI27L2Q9H2X8 130 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 RIBC2Q9H4K1 309 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 ZNF355PQ9NSJ1 428 aa5.84□□□□□ -1.47
NXF1-215ENST00000533440 PAK1IP1Q9NWT1 392 aaPredicted RBP5.84□□□□□ -1.47
NXF1-215ENST00000533440 METTL1Q9UBP6 276 aaKnown RBP5.84□□□□□ -1.47
NXF1-215ENST00000533440 LOC102724200A0A096LPH7 203 aaPredicted RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 TCRBV3S1A0A5B6 114 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 MSGN1A6NI15 193 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 TMEM212A6NML5 194 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 SPDEFO95238 335 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 GSTP1P09211 210 aaKnown RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 GTF2F2P13984 249 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 BMI1P35226 326 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 ZNF93P35789 620 aaPredicted RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 POLR2IP36954 125 aaKnown RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 KIR2DS2P43631 304 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 DEFA5Q01523 94 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 FXYD3Q14802 87 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 GLDNQ6ZMI3 551 aaPredicted RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 ACBD7Q8N6N7 88 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 BVESQ8NE79 360 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 OR2AK2Q8NG84 335 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 OR5AN1Q8NGI8 311 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 OR5AK2Q8NH90 309 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 PHLDA1Q8WV24 401 aaPredicted RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 TSEN15Q8WW01 171 aaKnown RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 SNAPC3Q92966 411 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 USMG5Q96IX5 58 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 TMEM68Q96MH6 324 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 PDCD1LG2Q9BQ51 273 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 FAM107BQ9H098 131 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 PARP12Q9H0J9 701 aaKnown RBP5.83□□□□□ -1.48
NXF1-215ENST00000533440 TAS2R4Q9NYW5 299 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 PIPOXQ9P0Z9 390 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 TP53TG1Q9Y2A0 90 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 WASHC3Q9Y3C0 194 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 HERC1Q15751 4861 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 LRP1BQ9NZR2 4599 aa5.83□□□□□ -1.48
NXF1-215ENST00000533440 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 BMPR1BO00238 502 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 RAB29O14966 203 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 RBMXL2O75526 392 aaKnown RBP5.82□□□□□ -1.48
NXF1-215ENST00000533440 DCTN3O75935 186 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 MAS1P04201 325 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 GLAP06280 429 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 GUCA2BQ16661 112 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 SLC22A6Q4U2R8 563 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 RPL39P5Q59GN2 51 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 DDI2Q5TDH0 399 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 DMKNQ6E0U4 476 aaPredicted RBP5.82□□□□□ -1.48
NXF1-215ENST00000533440 RAB12Q6IQ22 244 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 SLC16A13Q7RTY0 426 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 SYS1Q8N2H4 156 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 GRPEL2Q8TAA5 225 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 WDR89Q96FK6 387 aaPredicted RBP5.82□□□□□ -1.48
NXF1-215ENST00000533440 NSL1Q96IY1 281 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 CYYR1Q96J86 154 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 S100A13Q99584 98 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 GABARAPL1Q9H0R8 117 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 TMEM138Q9NPI0 162 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 TECRQ9NZ01 308 aaKnown RBP5.82□□□□□ -1.48
NXF1-215ENST00000533440 KCNIP1Q9NZI2 227 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 ENOPH1Q9UHY7 261 aa5.82□□□□□ -1.48
NXF1-215ENST00000533440 EXOGQ9Y2C4 368 aaKnown RBP5.82□□□□□ -1.48
NXF1-215ENST00000533440 ARL2BPQ9Y2Y0 163 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms